Escherichia coli YD786 |
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Putative Escherichia coli YD786 RM systems
Ref: Guo,Q. et al. unpublished
REBASE ref # 20858
Complete sequence: 4,863,501 bp
GenBank #: CP013112
REBASE acronym: Eco786
Org_num: 17418
All begin ASE18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3250 | transposase | |||
| 3255 | M | M.EcosEC21ORF13545P (100% identity) | M.Eco786ORF3255P | |
| 3260 | 50S ribosome-binding GTPase | |||
| 11605 | chromosome partitioning protein ParB | |||
| 11610 | M | M.SenS688ORF13495P (100% identity) | M.Eco786ORF11610P | |
| 11615 | S | S.Sen12509ORF5865P (100% identity) | S.Eco786ORF11610P | |
| 11620 | R | Sen12509ORF5865P (100% identity) | Eco786ORF11610P | |
| 11625 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7965 | multidrug DMT transporter | |||
| 7970 | V | V.SflFF64DcmP (100% identity) | V.Eco786DcmP | |
| 7975 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco786DcmP |
| 7980 | hydrolase | |||
| 15075 | Fis family transcriptional regulator | |||
| 15080 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco786ORF15080P |
| 15085 | 59 aa hypothetical protein | |||
| 15715 | ribulose phosphate epimerase | |||
| 15720 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco786DamP |
| 15725 | cell division protein DamX | |||
| 19590 | 330 aa hypothetical protein | |||
| 19595 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco786ORF19595P |
| 19600 | LexA family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3925 | pseudogene | |||
| ??? | R | EcoteDMcrBP (92% identity) | Eco786McrBP | |
| ??? | R | EmaE2C08McrCP (100% identity) | Eco786McrCP | |
| 3940 | anti-adapter protein IraM | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2080 | 75 aa hypothetical protein | |||
| 2085 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco786ORF2085P |
| 2090 | endonuclease | |||
| 23045 | 96 aa hypothetical protein | |||
| 23050 | M | M.EcoBE127ORF13555P (100% identity) | GATC | M.Eco786ORF23050P |
| 23055 | LexA family transcriptional regulator | |||