Clostridium homopropionicum DSM 5847 |
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Putative Clostridium homopropionicum DSM 5847 RM systems
Ref: Beck,M.H. et al. Genome Announc 3 (5), e01112-15 (2015)
REBASE ref # 20793
Contig set: 3,650,535 bp
GenBank #: LHUR00000000 (NZ_LHUR00000000)
REBASE acronym: Cho5847
Org_num: 17365
All begin CLHOM_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20900 | 164 aa hypothetical protein | |||
| 20910 | R | PspC3ORF3635P (98% identity) | Cho5847ORF20930P | |
| 20920 | S | S.TspRe1ORF2225P (80% identity) | S.Cho5847ORF20930P | |
| 20930 | M | M.PspC3ORF3635P (97% identity) | M.Cho5847ORF20930P | |
| 20940 | 567 aa hypothetical protein | |||
| 21330 | 336 aa hypothetical protein | |||
| 21340 | S | type I restriction modification DNA specificity | S.Cho5847ORF21340P | |
| 21350 | 353 aa hypothetical protein | |||
| 21360 | tyrosine recombinase XerC | |||
| 21370 | R | CpaAIIP (73% identity) | Cho5847ORF21340P | |
| 21380 | 160 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2880 | 103 aa hypothetical protein | |||
| 2890 | M | M2.Csp214ORFLP (85% identity) | M1.Cho5847ORF2890P | |
| 2900 | M | M.Cbu3989ORF905P (91% identity) | M2.Cho5847ORF2890P | |
| 2910 | HNH endonuclease | |||
| 16510 | 227 aa hypothetical protein | |||
| 16520 | M | M.CspCT4ORF14090P (100% identity) | GGCC | M1.Cho5847ORF16520P |
| 16530 | M | M.CspCT4ORF14085P (100% identity) | M2.Cho5847ORF16520P | |
| 16540 | S-adenosylmethionine synthase | |||
| 3080 | NACHT domain protein | |||
| 3090 | M | M.Cbe124ORF29840P (82% identity) | GATC | M.Cho5847ORF3090P |
| 3100 | R | CalB3IIIP (79% identity) | GATC | Cho5847ORF3090P |
| 3110 | 23S rRNA (uracil-C(5))-methyltransferase RlmCD | |||
| 11620 | initiator replication protein | |||
| 11630 | R | Pst19aORF1527P (69% identity) | TTCGAA | Cho5847ORF11640P |
| 11640 | M | M.Ece12421I (40% identity) | TTCGAA | M.Cho5847ORF11640P |
| 11650 | tyrosine recombinase XerD | |||
| 30370 | 271 aa hypothetical protein | |||
| 30380 | RM | PfuCFX1ORF2451P (26% identity) | Cho5847ORF30380P | |
| 6940 | anti-sigma F factor antagonist | |||
| 6950 | M | M.Cth5974ORF6330P (62% identity) | M.Cho5847ORF6950P | |
| 6960 | methenyltetrahydrofolate cyclohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16730 | 546 aa hypothetical protein | |||
| 16740 | M | M.GfeIRF9ORF23455P (92% identity) | M.Cho5847ORF16740P | |
| 16750 | R | BanORFDP (97% identity) | Cho5847ORF16740P | |
| 16760 | 23S rRNA (uracil-C(5))-methyltransferase RlmCD | |||