Escherichia coli LSPQ A134697 |
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Putative Escherichia coli LSPQ A134697 RM systems
Ref: Bekal,S. et al. Genome Announc 3 (5), e01152-15 (2015)
REBASE ref # 20782
Contig set: 5,228,778 bp
GenBank #: LELX00000000 (NZ_LELX00000000)
REBASE acronym: Eco34697
Org_num: 17303
All begin AB747_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20955 | endoribonuclease SymE | |||
| 20960 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco34697ORF20965P |
| 20965 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.Eco34697ORF20965P |
| 20970 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco34697ORF20965P |
| 20975 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 685 | LexA family transcriptional regulator | |||
| 690 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco34697ORF690P |
| 695 | 162 aa hypothetical protein | |||
| 990 | LexA family transcriptional regulator | |||
| 995 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco34697ORF995P |
| 1000 | 162 aa hypothetical protein | |||
| 1275 | phage protein | |||
| 1280 | M | M.Ecos142ORF20090P (100% identity) | M.Eco34697ORF1280P | |
| 1285 | holin | |||
| 19355 | 75 aa hypothetical protein | |||
| 19375 | M | M.SboBSORF1444P (100% identity) | M.Eco34697ORF19375P | |
| 19380 | TrmB family transcriptional regulator | |||
| 1475 | protein ninE | |||
| 1480 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco34697ORF1480P |
| 1485 | P21 prophage-derived protein NinB | |||
| 3635 | 59 aa hypothetical protein | |||
| 3640 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco34697ORF3640P |
| 3645 | Fis family transcriptional regulator | |||
| 16775 | 118 aa hypothetical protein | |||
| 16780 | M | M.EcosS3ORF15775P (100% identity) | M.Eco34697ORF16780P | |
| 16785 | ATPase | |||
| 21310 | 103 aa hypothetical protein | |||
| 21315 | M | M.Sfl0030ORFCP (100% identity) | M.Eco34697ORF21315P | |
| 21320 | 73 aa hypothetical protein | |||
| 16485 | nuclease | |||
| 16490 | M | M.EcoDEC9DORF3047P (99% identity) | M.Eco34697ORF16490P | |
| 16495 | 309 aa hypothetical protein | |||
| 22020 | ribulose-phosphate 3-epimerase | |||
| 22025 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco34697DamP |
| 22030 | cell division protein DamX | |||
| 8190 | membrane protein | |||
| ??? | M | M.EcoVL02ORF18020P (99% identity) | M.Eco34697ORF8195P | |
| 8200 | membrane protein | |||
| 11820 | 75 aa hypothetical protein | |||
| 11825 | M | M.EcoRS218ORF2285P (100% identity) | GATC | M.Eco34697ORF11825P |
| 11830 | endonuclease | |||
| 9235 | multidrug DMT transporter | |||
| 9240 | V | V.SflC32DcmP (74% identity) | V.Eco34697DcmP | |
| 9245 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.Eco34697DcmP |
| 9250 | hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20970 | DEAD/DEAH box helicase | |||
| 20975 | R | EcosS1MrrP (100% identity) | Eco34697MrrP | |
| 20980 | GTP-binding protein | |||