Streptomyces species JHA19 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Streptomyces species JHA19 RM systems
Ref: Takegawa,K. et al. unpublished
REBASE ref # 20761
Contig set: 7,708,767 bp
GenBank #: BBRS00000000 (NZ_BBRS00000000)
REBASE acronym: SspJHA19
Org_num: 17251
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19 | 262 aa hypothetical protein F750_1571 | |||
| 23 | R | Svi6ORF18710P (95% identity) | SspJHA19ORFIP | |
| 33 | S | S.Ssp271ORF11085P (60% identity) | S.SspJHA19ORFIP | |
| 37 | M | M.Ssp594ORF18720P (92% identity) | M.SspJHA19ORFIP | |
| 42 | 137 aa hypothetical protein | |||
| 1430 | 166 aa hypothetical protein | |||
| 1434 | M | M.Sas41452ORF16345P (69% identity) | M.SspJHA19ORFCP | |
| 1447 | DNA-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 118 | 129 aa hypothetical protein | |||
| 122 | M | M.Ssp663ORF14100P (37% identity) | M.SspJHA19ORFAP | |
| 127 | diguanylate cyclase | |||
| 200 | 292 aa hypothetical protein | |||
| 203 | M | M2.Ssp452ORF12635P (69% identity) | M1.SspJHA19ORFHP | |
| 209 | M | M1.Ssp452ORF12635P (88% identity) | GCCGGC | M2.SspJHA19ORFHP |
| 213 | V | V.Ssp452ORF12635P (69% identity) | V.SspJHA19ORFHP | |
| 216 | preprotein translocase subunit SecA | |||
| 327 | 156 aa hypothetical protein | |||
| 329 | RM | Sga8ORF6935P (63% identity) | SspJHA19ORFDP | |
| 346 | 192 aa hypothetical protein | |||
| 430 | 213 aa hypothetical protein | |||
| 431 | M | M.Ssp443ORF9655P (79% identity) | M.SspJHA19ORFFP | |
| 439 | 721 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 93 | 110 aa hypothetical protein | |||
| 95 | R | SfuF9MrrP (97% identity) | SspJHA19MrrP | |
| 99 | 109 aa hypothetical protein | |||
| 404 | RNA polymerase sigma factor rpoD | |||
| 412 | R | Ssp005McrBP (84% identity) | SspJHA19McrBP | |
| 420 | R | Seu01735McrCP (86% identity) | SspJHA19McrCP | |
| 425 | DNA helicase UvrD | |||