Sulfurihydrogenibium species YO3AOP1 |
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Putative Sulfurihydrogenibium species YO3AOP1 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10651
Complete sequence: 1,838,442 bp
GenBank #: CP001080 (NC_010730)
REBASE acronym: SspY
Org_num: 5097
All begin SYO3AOP1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 386 | oligopeptide/dipeptide ABC transporter, ATPase | |||
| 387 | S | S.Tth5008ORF15790P (40% identity) | S.SspYORF387P | |
| 388 | aminotransferase class I and II | |||
| 1356 | peptide chain release factor 2 | |||
| 1357 | S | S.DspRE01ORF1650P (43% identity) | S.SspYORF1357P | |
| 1358 | Prephenate dehydrogenase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20 | ribonuclease Z | |||
| 21 | R | Tsp34ORFAP (64% identity) | CTAG | SspYORF22P |
| 22 | M | M.TgeOPF15ORF1159P (71% identity) | CTAG | M.SspYORF22P |
| 23 | Inositol phosphatase/fructose-16-bisphosphatase | |||
| 215 | 483 aa hypothetical protein | |||
| 216 | M | M.Csp11764ORF508P (27% identity) | GTAC | M.SspYORF216P |
| 217 | 433 aa hypothetical protein | |||
| 338 | 3-isopropylmalate dehydratase, small subunit | |||
| 339 | R | Hal24586IIIP (47% identity) | SspYORF340P | |
| 340 | M | M.MaeIII (56% identity) | M.SspYORF340P | |
| 341 | HMG-I and HMG-Y DNA-binding domain protein | |||
| 490 | helicase domain protein | |||
| 491 | RM | Ial16511ORF1934P (29% identity) | SspYORF491P | |
| 492 | 312 aa hypothetical protein | |||
| 1089 | uroporphyrinogen decarboxylase | |||
| 1090 | M | M.SazADamP (55% identity) | GATC | M.SspYDamP |
| 1091 | 68 aa hypothetical protein | |||
| 1589 | cysteinyl-tRNA synthetase | |||
| 1590 | M | M.HspT2ORF9030P (64% identity) | M.SspYORF1590P | |
| 1591 | R | TagP1ORF11250P (53% identity) | SspYORF1590P | |
| 1592 | 46 aa hypothetical protein | |||
| 1668 | holo-acyl-carrier-protein synthase | |||
| 1669 | RM | HspSNORF1441P (68% identity) | SspYORF1669P | |
| 1670 | helicase domain protein | |||
| 1724 | orotidine 5-phosphate decarboxylase | |||
| 1725 | M | M.Nba55ORF5010P (68% identity) | GGNCC | M.SspYORF1725P |
| 1726 | R | EsaRM63ORFAP (57% identity) | GGNCC | SspYORF1725P |
| 1727 | RNA polymerase, sigma 54 subunit, RpoN | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 147 | preprotein translocase, YajC subunit | |||
| 148 | R | SfuMMrrP (51% identity) | SspYMrrP | |
| 149 | 298 aa hypothetical protein | |||