Escherichia coli SN5 |
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Putative Escherichia coli SN5 RM systems
Ref: Sidjabat,H.E. et al. Genome Announc 3 (4), e00983-15 (2015)
REBASE ref # 20492
Contig set: 5,214,149 bp
GenBank #: LFXU00000000 (NZ_LFXU00000000)
REBASE acronym: EcoSN5
Org_num: 17176
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 87 | 217 aa hypothetical protein | |||
| 90 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoSN5ORFBP |
| 92 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoSN5ORFBP |
| 96 | R | EcosS9ORF4930P (99% identity) | AAAGNNNNGTT | EcoSN5ORFBP |
| 102 | 63 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6 | Uncharacterised protein | |||
| 8 | M | M.SflN101ORF24625P (99% identity) | M.EcoSN5ORFCP | |
| 12 | 144 aa hypothetical protein | |||
| 18 | Uncharacterised protein | |||
| 21 | M | M.Sfl0030ORFCP (100% identity) | M.EcoSN5ORFEP | |
| 26 | 73 aa hypothetical protein | |||
| 31 | 77 aa hypothetical protein EC40967_A0158 | |||
| 32 | M | M.Ssp15303DcmP (100% identity) | CCWGG | M.EcoSN5Dcm2P |
| 35 | 439 aa hypothetical protein | |||
| 48 | 75 aa hypothetical protein | |||
| 49 | M | M.EcoPnTigORFFP (99% identity) | M.EcoSN5ORFFP | |
| 50 | 90 aa hypothetical protein | |||
| 50 | 284 aa hypothetical protein | |||
| 51 | M | M.Ssp15303ORFEP (100% identity) | M.EcoSN5ORFIP | |
| 52 | DNA-binding protein | |||
| 74 | 198 aa hypothetical protein | |||
| 75 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoSN5ORFDP |
| 76 | histidine kinase | |||
| 109 | ribulose-phosphate 3-epimerase | |||
| 110 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSN5DamP |
| 112 | cell division protein DamX | |||
| 151 | HD domain protein | |||
| 153 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoSN5DcmP |
| ??? | V | V.SflC32DcmP (74% identity) | V.EcoSN5DcmP | |
| 159 | multidrug DMT transporter | |||
| 288 | recombination protein ninB from phage origin | |||
| 290 | M | M.EcoleORFAP (100% identity) | GATC | M.EcoSN5ORFGP |
| 294 | 115 aa conserved hypothetical protein | |||
| 829 | DNA-binding protein fis | |||
| 831 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoSN5ORFAP |
| 833 | 59 aa hypothetical protein | |||