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Putative Escherichia coli CR48 RM systems
Ref: Sidjabat,H.E. et al. Genome Announc 3 (4), e00983-15 (2015)
REBASE ref # 20492
Contig set: 5,184,489 bp
GenBank #: LFXT00000000 (NZ_LFXT00000000)
REBASE acronym: EcoCR48
Org_num: 17175
All begin ORF_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
466 | 103 aa hypothetical protein | |||
??? | M | M.EcoZ247ORF19790P (100% identity) | M.EcoCR48ORFEP | |
472 | S | S.EcoZ247ORF19790P (100% identity) | S.EcoCR48ORFEP | |
473 | R | EcoT219ORF19770P (100% identity) | EcoCR48ORFEP | |
478 | 237 aa hypothetical protein | |||
635 | 63 aa hypothetical protein | |||
636 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoCR48ORFFP |
643 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoCR48ORFFP |
647 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoCR48ORFFP |
648 | 217 aa hypothetical protein | |||
624 | molecular chaperone Tir | |||
626 | M | M.EcoW004ORF18655P (100% identity) | M.EcoCR48ORFDP | |
628 | S | S.EcoW004ORF18655P (100% identity) | S.EcoCR48ORFDP | |
629 | membrane protein | |||
630 | 117 aa hypothetical protein | |||
631 | R | EcoW004ORF18655P (99% identity) | EcoCR48ORFDP | |
635 | 165 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
9 | ATPase-like protein | |||
15 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoCR48ORFGP |
19 | TIGR02687 family protein | |||
23 | 59 aa hypothetical protein | |||
24 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoCR48ORFCP |
27 | DNA-binding protein fis | |||
84 | 103 aa hypothetical protein | |||
88 | M | M.Sfl7ORF23565P (100% identity) | M.EcoCR48ORFHP | |
93 | 73 aa hypothetical protein | |||
388 | multidrug DMT transporter | |||
??? | V | V.SflC32DcmP (74% identity) | V.EcoCR48DcmP | |
393 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoCR48DcmP |
395 | 231 aa hypothetical protein EC958_2227 | |||
1318 | 71 aa hypothetical protein | |||
1319 | M | M.KaeCRE8ORF15605P (100% identity) | M.EcoCR48ORFBP | |
1322 | DNA-binding helix-turn-helix protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
458 | filamentation induced by cAMP protein Fic | |||
462 | R | EcoW004GmrDP (100% identity) | EcoCR48GmrDP | |
467 | 784 aa hypothetical protein | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
108 | ribulose-phosphate 3-epimerase | |||
109 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoCR48ORFAP |
111 | cell division protein DamX |