Pseudobacteroides cellulosolvens ATCC 35603 |
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Putative Pseudobacteroides cellulosolvens ATCC 35603 RM systems
Ref: Dassa,B. et al. Genome Announc 3 (5), e01022-15 (2015)
REBASE ref # 20418
Contig set: 6,878,816 bp
GenBank #: LGTC00000000 (NZ_LGTC00000000)
REBASE acronym: Pce2933
Org_num: 17181
All begin Bccel_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2964 | protein of unknown function DUF955 | |||
| 2965 | S | S.CspVKFORFDP (31% identity) | S.Pce2933ORF2966P | |
| 2966 | M | M.CscSt60ORF6350P (82% identity) | M.Pce2933ORF2966P | |
| 2967 | R | Eti1ORF11200P (57% identity) | Pce2933ORF2966P | |
| 2968 | Resolvase domain-containing protein | |||
| 4257 | 134 aa hypothetical protein | |||
| ??? | M | M.AceCD2ORF1348P (96% identity) | M.Pce2933ORF4258P | |
| 4260 | protein of unknown function DUF1016 | |||
| 4261 | S | S.AceCD2ORF1348P (33% identity) | S.Pce2933ORF4258P | |
| 4262 | integral membrane sensor signal transduction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 111 | 125 aa hypothetical protein | |||
| 112 | M | M.Chu14427ORF12990P (59% identity) | M.Pce2933ORF112P | |
| 113 | 144 aa hypothetical protein | |||
| 3028 | protein of unknown function DUF3848 | |||
| 3029 | M | M.DspDCMORF1530P (48% identity) | M.Pce2933ORF3029P | |
| 3030 | 106 aa hypothetical protein | |||
| 4319 | integrase family protein | |||
| 4320 | M | C-5 cytosine-specific DNA methylase | GGCC | M1.Pce2933ORF4320P |
| 4321 | integrase family protein | |||
| 4322 | integrase family protein | |||
| 4323 | integrase family protein | |||
| 4324 | M | C-5 cytosine-specific DNA methylase | GGCC | M2.Pce2933ORF4320P |
| 4325 | DNA methylase N-4/N-6 domain protein | |||
| 4324 | C-5 cytosine-specific DNA methylase | |||
| 4325 | M | M1.AceCD2ORF988P (100% identity) | M.Pce2933ORF4325P | |
| 4326 | 291 aa hypothetical protein | |||
| 4326 | 291 aa hypothetical protein | |||
| 4327 | M | M.AceCD2ORF986P (100% identity) | M.Pce2933ORF4327P | |
| 4328 | phosphoadenosine phosphosulfate reductase | |||
| 4765 | SNF2-related protein | |||
| 4766 | M | M1.Tce8682ORF2255P (38% identity) | M.Pce2933ORF4766P | |
| 4767 | Protein of unknown function DUF3780 | |||
| 5501 | sporulation transcriptional regulator SpoIIID | |||
| 5502 | M | M.CesCF016ORF25940P (62% identity) | GCGC | M.Pce2933ORF5502P |
| 5503 | Periplasmic binding protein domain containing | |||
| 5754 | 162 aa hypothetical protein | |||
| 5755 | RM | SmuNG8ORF4240P (44% identity) | GCGATG | Pce2933ORF5755P |
| 5756 | DNA methylase N-4/N-6 domain protein | |||
| 5755 | restriction endonuclease | |||
| 5756 | M | M.PmeBin156ORFBP (67% identity) | M.Pce2933ORF5756P | |
| 5757 | 254 aa hypothetical protein | |||
| 5773 | 211 aa hypothetical protein | |||
| 5774 | M | M.PjiNM7ORF3725P (72% identity) | ACNNNNNCTCC | M.Pce2933ORF5774P |
| 5775 | restriction modification system DNA specificity | |||