Escherichia coli 36084 |
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Putative Escherichia coli 36084 RM systems
Ref: Delannoy,S. et al. Genome Announc 3 (4), e00852-15 (2015)
REBASE ref # 20298
Contig set: 5,234,703 bp
GenBank #: LDXI00000000 (NZ_LDXI00000000)
REBASE acronym: Eco36084
Org_num: 16930
All begin ABE95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1685 | endoribonuclease SymE | |||
| 1690 | S | S.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | S.Eco36084ORF1695P |
| ??? | M | M.EcoO26ORF5541P (100% identity) | TACNNNNNNNRTRTC | M.Eco36084ORF1695P |
| 1700 | R | EcosLF82ORF3455P (100% identity) | TACNNNNNNNRTRTC | Eco36084ORF1695P |
| 1705 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23040 | 108 aa hypothetical protein | |||
| 23060 | M | M.EcoDCE7ORF11470P (100% identity) | M.Eco36084ORF23060P | |
| 23065 | TrmB family transcriptional regulator | |||
| 6840 | Shiga toxin subunit A | |||
| 6860 | M | M.EcoZ1836ORF11435P (100% identity) | M.Eco36084ORF6860P | |
| 6865 | TrmB family transcriptional regulator | |||
| 8510 | protein ninE | |||
| 8515 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco36084ORF8515P |
| 8520 | ninB protein | |||
| 26085 | LexA family transcriptional regulator | |||
| 26090 | M | M.EcoSTEC411ORF14855P (100% identity) | GATC | M.Eco36084ORF26090P |
| 26095 | 162 aa hypothetical protein | |||
| 25915 | alkaline phosphatase | |||
| 25920 | RM | EcosW25KORF12230P (100% identity) | Eco36084ORF25920P | |
| 25925 | DNA repair protein | |||
| 24035 | 72 aa hypothetical protein | |||
| 24040 | M | M.EcopO26ORF185P (100% identity) | M.Eco36084ORF24040P | |
| 24045 | 103 aa hypothetical protein | |||
| 20605 | integrase | |||
| 20610 | M | M.KpnFF77ORF20840P (100% identity) | GTAC | M.Eco36084ORF20610P |
| 20615 | membrane protein | |||
| 7390 | multidrug DMT transporter | |||
| 7395 | V | V.SflSTLE3DcmP (100% identity) | V.Eco36084DcmP | |
| 7400 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco36084DcmP |
| 7405 | hydrolase | |||
| 14970 | cell division protein DamX | |||
| 14975 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco36084DamP |
| 14980 | ribulose-phosphate 3-epimerase | |||
| 8440 | Fis family transcriptional regulator | |||
| 8445 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco36084ORF8445P |
| 8450 | 59 aa hypothetical protein | |||