Salmonella enterica subsp. enterica serovar Derby 07CR553 |
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Putative Salmonella enterica subsp. enterica serovar Derby 07CR553 RM systems
Ref: Kerouanton,A. et al. Genome Announc 3 (4), e00853-15 (2015)
REBASE ref # 20297
Contig set: 4,817,380 bp
GenBank #: LAZB00000000 (NZ_LAZB00000000)
REBASE acronym: Sen553
Org_num: 16901
All begin RU61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4161 | 322 aa hypothetical protein | |||
| 4162 | R | SensTJX21ORF11885P (100% identity) | Sen553ORF4163P | |
| 4163 | M | M.SensTJX21ORF11885P (100% identity) | M.Sen553ORF4163P | |
| 4164 | S | S.SensTJX21ORF11885P (100% identity) | S.Sen553ORF4163P | |
| 4165 | Toxic protein SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3246 | Crossover junction endodeoxyribonuclease RusA | |||
| 3247 | M | M.Sen8646ORF17540P (100% identity) | GATC | M.Sen553ORF3247P |
| 3248 | 157 aa hypothetical protein | |||
| 2093 | Ribulose-phosphate 3-epimerase | |||
| 2094 | M | M.StyTDamP (100% identity) | GATC | M.Sen553DamP |
| 2095 | cell division protein DamX | |||
| 441 | 188 aa hypothetical protein | |||
| 442 | R | SenS1441ORF6315P (100% identity) | CTGCAG | Sen553ORF443P |
| 443 | M | M.SenS1441ORF6315P (100% identity) | CTGCAG | M.Sen553ORF443P |
| 444 | DNA-invertase hin | |||
| 3808 | DNA-invertase hin | |||
| 3809 | M | M.SspW3ORF4074P (100% identity) | CTGCAG | M.Sen553ORF3809P |
| 3810 | R | Sen86ORF22630P (100% identity) | CTGCAG | Sen553ORF3809P |
| 3811 | 214 aa hypothetical protein | |||
| 3660 | PerC transcriptional activator | |||
| ??? | M | M.Sso30ORF925P (88% identity) | GATC | M.Sen553ORFAP |
| 3661 | LexA repressor | |||
| 3666 | 64 aa hypothetical protein | |||
| 3667 | M | M.SensSZL38ORF10585P (100% identity) | M.Sen553ORF3667P | |
| 3668 | Phage holin family (Lysis protein S) | |||
| 2311 | DNA-binding protein Fis | |||
| 2312 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen553ORF2312P |
| 2313 | 54 aa hypothetical protein | |||
| 904 | inner membrane transporter YedA | |||
| 905 | V | V.StyUK1DcmP (100% identity) | V.Sen553DcmP | |
| 906 | M | M.SensTJX21DcmP (100% identity) | CCWGG | M.Sen553DcmP |
| 907 | hydrolase | |||
| 4197 | RM | SensTJX21ORF12050P (100% identity) | Sen553ORF4197P | |
| 4198 | RNA polymerase-associated protein RapA | |||
| 4512 | LexA repressor | |||
| 4513 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sen553ORF4513P |
| 4514 | gntR familyl regulatory protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 69 | sialic acid transporter | |||
| 70 | M | M.SensTJX21ORF9690P (100% identity) | CAGAG | M.Sen553ORF70P |
| 71 | R | StyUK1IP (99% identity) | CAGAG | Sen553ORF70P |
| 72 | 33 aa hypothetical protein | |||