Salmonella enterica subsp. enterica serovar Typhimurium smonpas007416-4 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium smonpas007416-4 RM systems
Ref: Orsini,M. et al. Genome Announc 3 (4), e00911-15 (2015)
REBASE ref # 20245
GenBank #: LFGO00000000
REBASE acronym: Sen74164
Org_num: 16952
All begin ABT89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17245 | restriction endonuclease | |||
| 17250 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen74164ORF17255P |
| 17255 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen74164ORF17255P |
| 17260 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen74164ORF17255P |
| 17265 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 55 | membrane protein | |||
| 60 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen74164ORF60P |
| 65 | Fis family transcriptional regulator | |||
| 6925 | hydrolase | |||
| 6930 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen74164DcmP |
| 6935 | V | V.StyUK1DcmP (100% identity) | V.Sen74164DcmP | |
| 6940 | pseudogene | |||
| 22545 | pseudogene | |||
| 22550 | M | M.StyTDamP (100% identity) | GATC | M.Sen74164DamP |
| 22555 | ribulose-phosphate 3-epimerase | |||
| 6680 | 157 aa hypothetical protein | |||
| ??? | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen74164ORF6685P |
| 6690 | crossover junction endodeoxyribonuclease | |||
| 17420 | hypothetical protein | |||
| 17425 | RM | StyUK1IV (100% identity) | GATCAG | Sen74164ORF17425P |
| 17430 | spermidine/putrescine ABC transporter ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15035 | cytochrome D ubiquinol oxidase subunit I | |||
| 15045 | R | StyUK1IP (99% identity) | CAGAG | Sen74164ORF15050P |
| 15050 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen74164ORF15050P |
| 15055 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17240 | membrane protein | |||
| 17245 | R | StyUK1MrrP (100% identity) | Sen74164Mrr2P | |
| 17250 | DEAD/DEAH box helicase | |||