Salmonella enterica subsp. enterica serovar Typhimurium smonpas004260-17 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium smonpas004260-17 RM systems
Ref: Orsini,M. et al. Genome Announc 3 (4), e00911-15 (2015)
REBASE ref # 20245
Contig set: 4,781,509 bp
GenBank #: LFGN00000000 (NZ_LFGN00000000)
REBASE acronym: Sen6017
Org_num: 30631
All begin ABT90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17580 | restriction endonuclease | |||
| 17585 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen6017ORF17590P |
| 17590 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen6017ORF17590P |
| 17595 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen6017ORF17590P |
| 17600 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 50 | membrane protein | |||
| 55 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen6017ORF55P |
| 60 | Fis family transcriptional regulator | |||
| 7110 | hydrolase | |||
| 7115 | M | M.StyUK1Dcm (99% identity) | CCWGG | M.Sen6017DcmP |
| 7120 | V | very short patch repair endonuclease | CCWGG | V.Sen6017DcmP |
| 7125 | multidrug DMT transporter | |||
| 17755 | DNA repair protein | |||
| 17760 | RM | StyUK1IV (100% identity) | GATCAG | Sen6017ORF17760P |
| 17765 | spermidine/putrescine ABC transporter ATPase | |||
| 975 | 77 aa hypothetical protein | |||
| 980 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen6017ORF980P |
| 985 | pseudogene | |||
| 22855 | cell division protein DamX | |||
| 22860 | M | M.StyTDamP (100% identity) | GATC | M.Sen6017DamP |
| 22865 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15300 | 33 aa hypothetical protein | |||
| 15305 | R | StyUK1IP (99% identity) | CAGAG | Sen6017ORF15310P |
| 15310 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen6017ORF15310P |
| 15315 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17575 | membrane protein | |||
| 17580 | R | StyUK1MrrP (100% identity) | Sen6017MrrP | |
| 17585 | DEAD/DEAH box helicase | |||