Salmonella enterica subsp. enterica serovar Typhimurium smonpas004260-8 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium smonpas004260-8 RM systems
Ref: Orsini,M. et al. Genome Announc 3 (4), e00911-15 (2015)
REBASE ref # 20245
GenBank #: LFDY00000000
REBASE acronym: Sen42608
Org_num: 16949
All begin ABT75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23150 | endoribonuclease SymE | |||
| 23155 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen42608ORF23160P |
| 23160 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen42608ORF23160P |
| 23165 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen42608ORF23160P |
| 23170 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1680 | 71 aa hypothetical protein | |||
| 1685 | M | M.Sbo812ORFAP (77% identity) | GATC | M.Sen42608ORF1685P |
| 17320 | Fis family transcriptional regulator | |||
| 17325 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen42608ORF17325P |
| 17330 | membrane protein | |||
| 17810 | ribulose-phosphate 3-epimerase | |||
| 17815 | M | M.StyTDamP (100% identity) | GATC | M.Sen42608DamP |
| 17820 | cell division protein DamX | |||
| 22985 | spermidine/putrescine ABC transporter ATPase | |||
| 22990 | RM | StyUK1IV (100% identity) | GATCAG | Sen42608ORF22990P |
| 22995 | DNA repair protein | |||
| 10150 | multidrug DMT transporter | |||
| 10155 | V | V.StyUK1DcmP (100% identity) | V.Sen42608DcmP | |
| 10160 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen42608DcmP |
| 10165 | hydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1890 | pseudogene | |||
| ??? | M | M.StyUK1I (99% identity) | CAGAG | M.Sen42608ORF1895P |
| 1900 | R | StyUK1IP (99% identity) | CAGAG | Sen42608ORF1895P |
| 1905 | 81 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23165 | DEAD/DEAH box helicase | |||
| 23170 | R | StyUK1MrrP (100% identity) | Sen42608MrrP | |
| 23175 | membrane protein | |||