Salmonella enterica subsp. enterica serovar Typhimurium smonpas001102-13 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium smonpas001102-13 RM systems
Ref: Orsini,M. et al. Genome Announc 3 (4), e00911-15 (2015)
REBASE ref # 20245
GenBank #: LFCG00000000
REBASE acronym: Sen1102
Org_num: 16943
All begin ABT70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17290 | pseudogene | |||
| 17295 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen1102ORF17300P |
| 17300 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen1102ORF17300P |
| 17305 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen1102ORF17300P |
| 17310 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 50 | membrane protein | |||
| 55 | M | pseudogene | ATGCAT | M.Sen1102ORF55P |
| 60 | Fis family transcriptional regulator | |||
| 6885 | hydrolase | |||
| 6890 | M | pseudogene | CCWGG | M.Sen1102DcmP |
| 6895 | V | very short patch repair endonuclease | CCWGG | V.Sen1102DcmP |
| 6900 | multidrug DMT transporter | |||
| 17465 | hypothetical protein | |||
| 17470 | RM | StyUK1IV (99% identity) | GATCAG | Sen1102ORF17470P |
| 17475 | pseudogene | |||
| 22570 | cell division protein DamX | |||
| 22575 | M | DNA adenine methylase | GATC | M.Sen1102DamP |
| 22580 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15045 | 33 aa hypothetical protein | |||
| 15050 | R | StyUK1IP (99% identity) | CAGAG | Sen1102ORF15055P |
| 15055 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen1102ORF15055P |
| 15060 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17285 | membrane protein | |||
| 17290 | R | Sen12416MrrP (100% identity) | Sen1102MrrP | |
| 17295 | DEAD/DEAH box helicase | |||