Salmonella enterica subsp. enterica serovar Typhimurium smonpas003168-4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium smonpas003168-4 RM systems
Ref: Orsini,M. et al. Genome Announc 3 (4), e00911-15 (2015)
REBASE ref # 20245
GenBank #: LFCH00000000
REBASE acronym: Sen31684
Org_num: 16945
All begin ABT73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23090 | endoribonuclease SymE | |||
| 23095 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen31684ORF23100P |
| 23100 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen31684ORF23100P |
| 23105 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen31684ORF23100P |
| 23110 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22925 | spermidine/putrescine ABC transporter ATPase | |||
| 22930 | RM | StyUK1IV (100% identity) | GATCAG | Sen31684ORF22930P |
| 22935 | DNA repair protein | |||
| 17265 | Fis family transcriptional regulator | |||
| 17270 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen31684ORF17270P |
| 17275 | membrane protein | |||
| 17750 | ribulose-phosphate 3-epimerase | |||
| 17755 | M | M.StyTDamP (100% identity) | GATC | M.Sen31684DamP |
| 17760 | cell division protein DamX | |||
| 6385 | multidrug DMT transporter | |||
| 6390 | V | V.StyUK1DcmP (100% identity) | V.Sen31684DcmP | |
| 6395 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen31684DcmP |
| 6400 | hydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12790 | 33 aa hypothetical protein | |||
| ??? | R | M.Sen2558ORF23295P (99% identity) | CAGAG | Sen31684ORF12800P |
| 12800 | M | M.Ssp11881II (100% identity) | CAGAG | M.Sen31684ORF12800P |
| 12810 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23105 | DEAD/DEAH box helicase | |||
| 23110 | R | StyUK1MrrP (100% identity) | Sen31684Mrr2P | |
| 23115 | membrane protein | |||