Salmonella enterica subsp. enterica serovar Typhimurium smonpas004260-1 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium smonpas004260-1 RM systems
Ref: Orsini,M. et al. Genome Announc 3 (4), e00911-15 (2015)
REBASE ref # 20245
GenBank #: LFCI00000000
REBASE acronym: Sen42601
Org_num: 16916
All begin ABT77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17375 | restriction endonuclease | |||
| 17380 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen42601ORF17385P |
| 17385 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen42601ORF17385P |
| 17390 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen42601ORF17385P |
| 17395 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 55 | membrane protein | |||
| 60 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen42601ORF60P |
| 65 | Fis family transcriptional regulator | |||
| 17545 | DNA repair protein | |||
| 17550 | RM | StyUK1IV (100% identity) | GATCAG | Sen42601ORF17550P |
| 17555 | pseudogene | |||
| 22650 | cell division protein DamX | |||
| 22655 | M | M.StyTDamP (100% identity) | GATC | M.Sen42601DamP |
| 22660 | ribulose-phosphate 3-epimerase | |||
| 6665 | 157 aa hypothetical protein | |||
| ??? | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen42601ORF6670P |
| 6675 | crossover junction endodeoxyribonuclease | |||
| 6885 | hydrolase | |||
| 6890 | M | M.StyUK1Dcm (99% identity) | CCWGG | M.Sen42601DcmP |
| 6895 | V | very short patch repair endonuclease | CCWGG | V.Sen42601DcmP |
| 6900 | pseudogene | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15075 | 33 aa hypothetical protein | |||
| 15080 | R | StyUK1IP (99% identity) | CAGAG | Sen42601ORF15085P |
| 15085 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen42601ORF15085P |
| 15090 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17370 | membrane protein | |||
| 17375 | R | StyUK1MrrP (100% identity) | Sen42601MrrP | |
| 17380 | DEAD/DEAH box helicase | |||