Burkholderia pseudomallei vgh16W |
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Putative Burkholderia pseudomallei vgh16W RM systems
Ref: Chen,Y.-L. et al. unpublished
REBASE ref # 20743
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,038,845 bp | CP012517 |
| chromosome 2: | 3,227,965 bp | CP012518 |
REBASE acronym: Bps16W
Org_num: 16819
All begin AM257_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2905 | 1445 aa hypothetical protein | |||
| 2910 | R | Bps16RORF2935P (100% identity) | Bps16WORF2930P | |
| 2915 | 285 aa hypothetical protein | |||
| 2920 | 206 aa hypothetical protein | |||
| 2925 | S | S.Bps16RORF2935P (100% identity) | S.Bps16WORF2930P | |
| 2930 | M | M.Bps16RORF2935P (100% identity) | M.Bps16WORF2930P | |
| 2935 | 752 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 795 | baseplate assembly protein | |||
| 800 | M | M.BpsPhiBEKORF6012P (100% identity) | M.Bps16WORF800P | |
| 805 | 176 aa hypothetical protein | |||
| 5520 | lysozyme | |||
| 5525 | M | M.Bps16RORF5520P (100% identity) | M.Bps16WORF5525P | |
| 5530 | LysR family transcriptional regulator | |||
| 16450 | phage tail protein | |||
| 16455 | M | M.BpsBGQORF208P (100% identity) | M.Bps16WORF16455P | |
| 16460 | phage tail protein | |||
| 17635 | 657 aa hypothetical protein | |||
| 17640 | M | M.BpsAORF7805P (99% identity) | M.Bps16WORF17640P | |
| 17645 | 920 aa hypothetical protein | |||
| chromosome 2 | ||||
| 27405 | 234 aa hypothetical protein | |||
| 27410 | M | M.Bps16RORF27370P (100% identity) | GGATG | M.Bps16WORF27410P |
| 27415 | 94 aa hypothetical protein | |||
| 27645 | tryptophan synthase alpha chain | |||
| 27650 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.Bps16WORF27650P |
| 27655 | tryptophan synthase subunit alpha | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 210 | porin | |||
| 215 | M | M.Bps16RORF215P (100% identity) | CACAG | M.Bps16WORF215P |
| 220 | R | BpsB03Yap7ORF18360P (100% identity) | CACAG | Bps16WORF215P |
| 225 | porin | |||
| 17685 | 285 aa hypothetical protein | |||
| 17690 | R | Bps16RORF17670P (100% identity) | Bps16WORF17695P | |
| 17695 | M | M.Bps16RORF17670P (100% identity) | M.Bps16WORF17695P | |
| 17700 | pseudogene | |||