Pseudomonas aeruginosa VRFPA01 |
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Putative Pseudomonas aeruginosa VRFPA01 RM systems
Ref: Murugan,N. et al. unpublished
REBASE ref # 17796
Contig set: 6,016,934 bp
GenBank #: AOBK00000000 (NZ_AOBK00000000)
REBASE acronym: PaeA01
Org_num: 16459
All begin G039_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 326545 | chromosome segregation protein SMC | |||
| 326550 | M | M2.Pas1ORF11035P (99% identity) | M2.PaeA01ORF326550P | |
| 326555 | M | M1.Pas1ORF11035P (100% identity) | M1.PaeA01ORF326550P | |
| 326560 | DNA protecting protein DprA | |||
| 327230 | R | PaesAG1ORF5747P (82% identity) | PaeA01ORF327230P | |
| 327235 | 263 aa hypothetical protein | |||
| ??? | M | M.PstYWX1ORFBP (31% identity) | M.PaeA01ORFAP | |
| 329000 | 203 aa hypothetical protein | |||
| 327555 | DNA invertase | |||
| 327560 | M | M.PaesAG1ORF5747P (100% identity) | M.PaeA01ORF327560P | |
| ??? | S | S.PaesAG1ORF5747P (100% identity) | S.PaeA01ORF327560P | |
| 327565 | 311 aa hypothetical protein | |||
| ??? | R | PaesAG1ORF5747P (99% identity) | PaeA01ORF327560P | |
| 327255 | helicase UvrD | |||
| 327260 | S | S.Pas1ORF11035P (100% identity) | S.PaeA01ORF327260P | |
| 327265 | R | Pas1ORF11035P (99% identity) | PaeA01ORF327260P | |
| 327270 | pseudogene | |||
| 300305 | 87 aa hypothetical protein | |||
| 300320 | M | M.Paes32ORF100P (100% identity) | M.PaeA01ORF300320P | |
| 300330 | R | Paes32ORF100P (100% identity) | PaeA01ORF300320P | |
| 300335 | XRE family transcriptional regulator | |||
| 329525 | 170 aa hypothetical protein | |||
| 329530 | R | PstG19ORF22455P (94% identity) | PaeA01ORF332445P | |
| 329535 | pseudogene | |||
| 329800 | 149 aa hypothetical protein | |||
| ??? | M | M.PstG19ORF22455P (59% identity) | M.PaeA01ORFGP | |
| 329845 | 1,4-alpha-glucan branching protein | |||
| 330210 | transposase | |||
| ??? | S | S.PstYWX1ORFBP (49% identity) | S.PaeA01ORFFP | |
| 330230 | pilus assembly protein | |||
| 330970 | ATPase AAA | |||
| 330975 | R | Pas1ORF11035P (99% identity) | PaeA01ORF327260P | |
| 330980 | S | S.Pas1ORF11035P (100% identity) | S.PaeA01ORF327260P | |
| 330985 | helicase UvrD | |||
| 330990 | chromosome segregation protein SMC | |||
| 330995 | M | M2.Pas1ORF11035P (99% identity) | M2.PaeA01ORF326550P | |
| 331000 | M | M1.Pas1ORF11035P (100% identity) | M1.PaeA01ORF326550P | |
| 331005 | DNA protecting protein DprA | |||
| 331875 | DNA invertase | |||
| 331880 | M | M.PaesAG1ORF5747P (100% identity) | M.PaeA01ORF327560P | |
| ??? | S | S.PaesAG1ORF5747P (100% identity) | S.PaeA01ORF327560P | |
| 331885 | 311 aa hypothetical protein | |||
| 331890 | R | PaesAG1ORF5747P (99% identity) | PaeA01ORF327560P | |
| 331895 | pseudogene | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 326875 | RM | PspI1ORF45040P (66% identity) | PaeA01ORF326875P | |
| 326880 | pseudogene | |||
| 327130 | helicase SNF2 | |||
| 327135 | RM | PaePA05ORF14460P (100% identity) | PaeA01ORF327135P | |
| 327140 | chromosome partitioning protein ParA | |||
| 328290 | 195 aa hypothetical protein | |||
| 328295 | M | M.PaePD2aORF12020P (100% identity) | M.PaeA01ORF328295P | |
| 328310 | 189 aa hypothetical protein | |||
| 328550 | 96 aa hypothetical protein | |||
| 328555 | M | M.PaePae36ORFAP (100% identity) | M.PaeA01ORF328555P | |
| 328560 | 227 aa hypothetical protein | |||
| 330375 | hypothetical protein | |||
| ??? | M | M.Pae16407ORFAP (67% identity) | M.PaeA01ORFEP | |
| 330385 | pseudogene | |||
| 330815 | protein-disulfide isomerase | |||
| ??? | M | M.PaeZY36ORF27030P (100% identity) | M.PaeA01ORFDP | |
| 330830 | 143 aa hypothetical protein | |||
| 331040 | chromosome partitioning protein ParA | |||
| ??? | RM | PaePA05ORF14460P (53% identity) | PaeA01ORF331045BP | |
| ??? | RM | PaePA05ORF14460P (46% identity) | PaeA01ORF331045AP | |
| 331055 | 85 aa hypothetical protein | |||
| 333300 | 227 aa hypothetical protein | |||
| 333305 | M | M.PaePae36ORFAP (100% identity) | M.PaeA01ORF328555P | |
| 333310 | 96 aa hypothetical protein | |||
| 333540 | 189 aa hypothetical protein | |||
| 333555 | M | M.PaePD2aORF12020P (100% identity) | M.PaeA01ORF328295P | |
| 333560 | 180 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | 125 aa hypothetical protein | PaeA01ORF329250P | |
| 329250 | M | M.PzhA252ORF13650P (98% identity) | M.PaeA01ORF329250P | |
| 329265 | membrane protein | |||
| ??? | R | PzhA252ORF13650P (86% identity) | PaeA01ORFHP | |
| 329285 | 70 aa hypothetical protein | |||
| 333835 | 319 aa hypothetical protein | |||
| ??? | R | PaeA01ORFHP (70% identity) | PaeA01ORFCP | |
| 333880 | 283 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 327265 | pseudogene | |||
| 327270 | R | Pas1McrBP (100% identity) | PaeA01McrBP | |
| 327275 | R | Pas1McrCP (34% identity) | PaeA01McrCP | |
| 330960 | 139 aa hypothetical protein | |||
| 330965 | R | Pas1McrCP (34% identity) | PaeA01McrCP | |
| 330970 | R | Pas1McrBP (100% identity) | PaeA01McrBP | |
| 330975 | DEAD/DEAH box helicase | |||