Escherichia coli STEC_C165-02 |
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Putative Escherichia coli STEC_C165-02 RM systems
Ref: Rasko,D. et al. unpublished
REBASE ref # 13962
Contig set: 5,009,267 bp
GenBank #: AFDR00000000 (NZ_AFDR00000000)
REBASE acronym: Eco16502
Org_num: 16133
All begin ECSTECC16502_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 283 | TIR protein | |||
| 284 | M | M1.EcoR47ORF16440P (90% identity) | M1.Eco16502ORF284P | |
| 285 | M | M2.EcoR47ORF16440P (100% identity) | M2.Eco16502ORF284P | |
| 286 | S | S.EcoR47ORF16440P (100% identity) | S.Eco16502ORF284P | |
| 287 | R | EcoR47ORF16440P (100% identity) | Eco16502ORF284P | |
| 288 | type I restriction modification DNA specificity | |||
| 335 | membrane protein | |||
| 336 | R | Ecos135ORF4680P (99% identity) | Eco16502ORF338P | |
| 337 | S | S.Ecos135ORF4680P (100% identity) | S.Eco16502ORF338P | |
| 338 | M | M.Ecos135ORF4680P (100% identity) | M.Eco16502ORF338P | |
| 339 | 699 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5022 | exonuclease, RdgC family protein | |||
| 5023 | M | M.Eco12579ORF25688P (100% identity) | M.Eco16502ORF5023P | |
| 5026 | 38 aa hypothetical protein | |||
| 4139 | ribulose-phosphate 3-epimerase | |||
| 4140 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco16502DamP |
| 4141 | protein damX domain protein | |||
| 1290 | phage/conjugal plasmid C-4 type zinc finger | |||
| 1291 | M | M.SenG094ORF11761P (100% identity) | GATC | M.Eco16502ORF1291P |
| 1292 | bacteriophage replication gene A family protein | |||
| 4027 | bacterial regulatory protein, Fis family | |||
| 4028 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.Eco16502ORF4028P |
| 4029 | 37 aa hypothetical protein | |||
| 2515 | carboxylate/Amino Acid/Amine Transporter family | |||
| 2516 | V | V.Ecostr9DcmP (74% identity) | V.Eco16502DcmP | |
| 2517 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.Eco16502DcmP |
| 2518 | HD domain protein | |||