Salmonella enterica subsp. enterica CFSAN024759 |
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Putative Salmonella enterica subsp. enterica CFSAN024759 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 19164
Contig set: 4,850,243 bp
GenBank #: JWQT00000000 (NZ_JWQT00000000)
REBASE acronym: Sen24759
Org_num: 16271
All begin QS12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6725 | molecular chaperone Tir | |||
| 6730 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen24759ORF6730P |
| ??? | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen24759ORF6730P |
| 6740 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen24759ORF6730P |
| 6745 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen24759ORF6730P |
| 6750 | pseudogene | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23635 | 97 aa hypothetical protein | |||
| 23640 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen24759ORF23640P |
| 23645 | ATPase | |||
| 23285 | ribulose-phosphate 3-epimerase | |||
| 23290 | M | M.StyTDamP (100% identity) | GATC | M.Sen24759DamP |
| 23295 | cell division protein DamX | |||
| 16360 | multidrug DMT transporter | |||
| 16365 | V | V.StyUK1DcmP (100% identity) | V.Sen24759DcmP | |
| 16370 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen24759DcmP |
| 16375 | hydrolase | |||
| 9905 | Fis family transcriptional regulator | |||
| 9910 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen24759ORF9910P |
| 9915 | membrane protein | |||
| 18380 | methyltransferase | |||
| 18385 | M | M.Sens29945ORF7970P (100% identity) | GATC | M.Sen24759ORFAP |
| 18390 | 82 aa hypothetical protein | |||
| 9100 | 75 aa hypothetical protein | |||
| 9105 | M | M.Sen24760ORF10410P (100% identity) | GATC | M.Sen24759ORF9105P |
| 9110 | endonuclease | |||
| 9120 | damage-inducible protein DinI | |||
| 9125 | M | M.Sen24760ORF10430P (100% identity) | CGGCCG | M.Sen24759ORF9125P |
| 9130 | R | Sen24760ORF10430P (100% identity) | CGGCCG | Sen24759ORF9125P |
| 9135 | Presumed portal vertex protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5325 | 33 aa hypothetical protein | |||
| 5330 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen24759ORF5335P |
| 5335 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen24759ORF5335P |
| 5340 | sugar transporter | |||