Salmonella enterica subsp. enterica serovar Agona 10.A.05 |
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Putative Salmonella enterica subsp. enterica serovar Agona 10.A.05 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,708,785 bp
GenBank #: CATR00000000 (NZ_CATR00000000)
REBASE acronym: Sen10A05
Org_num: 16241
All begin SA10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4254 | filamentation induced by cAMP protein Fic | |||
| 4255 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen10A05ORF4257P |
| 4256 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen10A05ORF4257P |
| 4257 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen10A05ORF4257P |
| 4258 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen10A05ORF4257P |
| 4259 | protein TIR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4001 | periplasmic protein | |||
| 4002 | M | DNA methylase | ATGCAT | M.Sen10A05ORF4002P |
| 4003 | DNA-binding protein Fis | |||
| 4596 | protein DamX | |||
| 4597 | M | DNA adenine methylase | GATC | M.Sen10A05DamP |
| 4598 | ribulose-phosphate 3-epimerase | |||
| 61 | 113 aa hypothetical protein | |||
| 62 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen10A05ORF62P |
| 63 | bacteriophage replication gene A | |||
| 64 | 62 aa hypothetical protein | |||
| 65 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen10A05ORF65P |
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen10A05ORF65P |
| 67 | pbsx family phage portal protein | |||
| 4273 | 670 aa hypothetical protein | |||
| 4274 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen10A05ORF4274P |
| 4275 | 97 aa hypothetical protein | |||
| 2502 | carboxylate/amino acid/amine transporter | |||
| 2503 | V | very short patch repair protein | V.Sen10A05DcmP | |
| 2504 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen10A05DcmP |
| 2505 | metal dependent phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 915 | cyanide-insensitive oxidase CioA | |||
| 916 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen10A05ORF917P |
| 917 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen10A05ORF917P |
| 918 | major facilitator superfamily MFS_1 | |||