Salmonella enterica subsp. enterica serovar Agona 02.O.05 |
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Putative Salmonella enterica subsp. enterica serovar Agona 02.O.05 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,922,280 bp
GenBank #: CATP00000000 (NZ_CATP00000000)
REBASE acronym: Sen02O05
Org_num: 16239
All begin SA02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4185 | filamentation induced by cAMP protein Fic | |||
| 4186 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen02O05ORF4188P |
| 4187 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen02O05ORF4188P |
| 4188 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen02O05ORF4188P |
| 4189 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen02O05ORF4188P |
| 4190 | protein TIR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4376 | protein YubE | |||
| 4377 | M | M.Sfl712783ORFFP (100% identity) | M.Sen02O05ORF4377P | |
| 4378 | YccB | |||
| 2751 | pbsx family phage portal protein | |||
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen02O05ORF2753P |
| 2753 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen02O05ORF2753P |
| 2754 | 62 aa hypothetical protein | |||
| 4015 | protein DamX | |||
| 4016 | M | DNA adenine methylase | GATC | M.Sen02O05DamP |
| 4017 | ribulose-phosphate 3-epimerase | |||
| 2755 | bacteriophage replication gene A | |||
| 2756 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen02O05ORF2756P |
| 2757 | 113 aa hypothetical protein | |||
| 1462 | DNA-binding protein Fis | |||
| 1463 | M | DNA methylase | ATGCAT | M.Sen02O05ORF1463P |
| 1464 | periplasmic protein | |||
| 4204 | 670 aa hypothetical protein | |||
| 4205 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen02O05ORF4205P |
| 4206 | 97 aa hypothetical protein | |||
| 944 | carboxylate/amino acid/amine transporter | |||
| 945 | V | very short patch repair protein | V.Sen02O05DcmP | |
| 946 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen02O05DcmP |
| 947 | metal dependent phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2141 | cyanide-insensitive oxidase CioA | |||
| 2142 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen02O05ORF2143P |
| 2143 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen02O05ORF2143P |
| 2144 | major facilitator superfamily MFS_1 | |||