Salmonella enterica subsp. enterica serovar Agona 13.E.05 |
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Putative Salmonella enterica subsp. enterica serovar Agona 13.E.05 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,752,291 bp
GenBank #: CATC00000000 (NZ_CATC00000000)
REBASE acronym: Sen13E05
Org_num: 16226
All begin SA13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2544 | filamentation induced by cAMP protein Fic | |||
| 2545 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen13E05ORF2547P |
| 2546 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen13E05ORF2547P |
| 2547 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen13E05ORF2547P |
| 2548 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen13E05ORF2547P |
| 2549 | protein TIR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3904 | 113 aa hypothetical protein | |||
| 3905 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen13E05ORF3905P |
| 3906 | bacteriophage replication gene A | |||
| 2828 | periplasmic protein | |||
| 2829 | M | DNA methylase | ATGCAT | M.Sen13E05ORF2829P |
| 2830 | DNA-binding protein Fis | |||
| 3907 | 62 aa hypothetical protein | |||
| 3908 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen13E05ORF3908P |
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen13E05ORF3908P |
| 3910 | pbsx family phage portal protein | |||
| 4639 | protein DamX | |||
| 4640 | M | DNA adenine methylase | GATC | M.Sen13E05DamP |
| 4641 | ribulose-phosphate 3-epimerase | |||
| 2563 | 670 aa hypothetical protein | |||
| 2564 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen13E05ORF2564P |
| 2565 | 97 aa hypothetical protein | |||
| 2341 | carboxylate/amino acid/amine transporter | |||
| 2342 | V | very short patch repair protein | V.Sen13E05DcmP | |
| 2343 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen13E05DcmP |
| 2344 | metal dependent phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 397 | major facilitator superfamily MFS_1 | |||
| 398 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen13E05ORF398P |
| 399 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen13E05ORF398P |
| 400 | cyanide-insensitive oxidase CioA | |||