Salmonella enterica subsp. enterica serovar Agona 14.E.05 |
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Putative Salmonella enterica subsp. enterica serovar Agona 14.E.05 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,751,639 bp
GenBank #: CATB00000000 (NZ_CATB00000000)
REBASE acronym: Sen14E05
Org_num: 16225
All begin SA14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2090 | filamentation induced by cAMP protein Fic | |||
| 2091 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen14E05ORF2093P |
| 2092 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen14E05ORF2093P |
| 2093 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen14E05ORF2093P |
| 2094 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen14E05ORF2093P |
| 2095 | protein TIR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4586 | ribulose-phosphate 3-epimerase | |||
| 4587 | M | DNA adenine methylase | GATC | M.Sen14E05DamP |
| 4588 | protein DamX | |||
| 2543 | periplasmic protein | |||
| 2544 | M | DNA methylase | ATGCAT | M.Sen14E05ORF2544P |
| 2545 | DNA-binding protein Fis | |||
| 61 | 113 aa hypothetical protein | |||
| 62 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen14E05ORF62P |
| 63 | bacteriophage replication gene A | |||
| 64 | 62 aa hypothetical protein | |||
| 65 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen14E05ORF65P |
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen14E05ORF65P |
| 67 | pbsx family phage portal protein | |||
| 2109 | 670 aa hypothetical protein | |||
| 2110 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen14E05ORF2110P |
| 2111 | 97 aa hypothetical protein | |||
| 1887 | carboxylate/amino acid/amine transporter | |||
| 1888 | V | very short patch repair protein | V.Sen14E05DcmP | |
| 1889 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen14E05DcmP |
| 1890 | metal dependent phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3098 | cyanide-insensitive oxidase CioA | |||
| 3099 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen14E05ORF3100P |
| 3100 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen14E05ORF3100P |
| 3101 | major facilitator superfamily MFS_1 | |||