Salmonella enterica subsp. enterica serovar Agona 17.H.06 |
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Putative Salmonella enterica subsp. enterica serovar Agona 17.H.06 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,786,625 bp
GenBank #: CASY00000000 (NZ_CASY00000000)
REBASE acronym: Sen17H06
Org_num: 16223
All begin SA17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3722 | protein TIR | |||
| 3723 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen17H06ORF3723P |
| 3724 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen17H06ORF3723P |
| 3725 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen17H06ORF3723P |
| 3726 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen17H06ORF3723P |
| 3727 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3706 | 97 aa hypothetical protein | |||
| 3707 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen17H06ORF3707P |
| 3708 | 670 aa hypothetical protein | |||
| 1611 | metal dependent phosphohydrolase | |||
| 1612 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen17H06DcmP |
| 1613 | V | V.StyUK1DcmP (100% identity) | V.Sen17H06DcmP | |
| 1614 | carboxylate/amino acid/amine transporter | |||
| 1967 | periplasmic protein | |||
| 1968 | M | DNA methylase | ATGCAT | M.Sen17H06ORF1968P |
| 1969 | DNA-binding protein Fis | |||
| 4689 | protein DamX | |||
| 4690 | M | DNA adenine methylase | GATC | M.Sen17H06DamP |
| 4691 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2539 | cyanide-insensitive oxidase CioA | |||
| 2540 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen17H06ORF2541P |
| 2541 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen17H06ORF2541P |
| 2542 | major facilitator superfamily MFS_1 | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 980 | DksA/TraR family C4-type zinc finger protein | |||
| ??? | M | M.Sen19F03ORFAP (100% identity) | GATC | M.Sen17H06ORFAP |
| 981 | bacteriophage replication gene A | |||