Salmonella enterica subsp. enterica serovar Agona 20.H.06 |
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Putative Salmonella enterica subsp. enterica serovar Agona 20.H.06 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,845,229 bp
GenBank #: CASV00000000 (NZ_CASV00000000)
REBASE acronym: Sen20H06
Org_num: 16235
All begin SA20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4390 | protein TIR | |||
| 4391 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen20H06ORF4391P |
| 4392 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen20H06ORF4391P |
| 4393 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen20H06ORF4391P |
| 4394 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen20H06ORF4391P |
| 4395 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4374 | 97 aa hypothetical protein | |||
| 4375 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen20H06ORF4375P |
| 4376 | 670 aa hypothetical protein | |||
| 1822 | uncharacterized protein | |||
| 1823 | RM | EcoW05E18ORF23695P (99% identity) | Sen20H06ORF1823P | |
| 1824 | uncharacterized protein | |||
| 2551 | periplasmic protein | |||
| 2552 | M | DNA methylase | ATGCAT | M.Sen20H06ORF2552P |
| 2553 | DNA-binding protein Fis | |||
| 4775 | protein DamX | |||
| 4776 | M | DNA adenine methylase | GATC | M.Sen20H06DamP |
| 4777 | ribulose-phosphate 3-epimerase | |||
| 2430 | carboxylate/amino acid/amine transporter | |||
| 2431 | V | V.StyUK1DcmP (100% identity) | V.Sen20H06DcmP | |
| 2432 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen20H06DcmP |
| 2433 | metal dependent phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2949 | cyanide-insensitive oxidase CioA | |||
| 2950 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen20H06ORF2951P |
| 2951 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen20H06ORF2951P |
| 2952 | major facilitator superfamily MFS_1 | |||