Salmonella enterica subsp. enterica serovar Agona 23.F.01 |
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Putative Salmonella enterica subsp. enterica serovar Agona 23.F.01 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,815,018 bp
GenBank #: CASS00000000 (NZ_CASS00000000)
REBASE acronym: Sen23F01
Org_num: 16220
All begin SA23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1546 | filamentation induced by cAMP protein Fic | |||
| 1547 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen23F01ORF1549P |
| 1548 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen23F01ORF1549P |
| 1549 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen23F01ORF1549P |
| 1550 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen23F01ORF1549P |
| 1551 | protein TIR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3081 | metal dependent phosphohydrolase | |||
| 3082 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen23F01DcmP |
| 3083 | V | V.StyUK1DcmP (100% identity) | V.Sen23F01DcmP | |
| 3084 | carboxylate/amino acid/amine transporter | |||
| 1841 | periplasmic protein | |||
| 1842 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen23F01ORF1842P |
| 1843 | DNA-binding protein Fis | |||
| 4707 | protein DamX | |||
| 4708 | M | DNA adenine methylase | GATC | M.Sen23F01DamP |
| 4709 | ribulose-phosphate 3-epimerase | |||
| 770 | DksA/TraR family C4-type zinc finger protein | |||
| 771 | M | M.SenSA5ORF21849P (100% identity) | GATC | M.Sen23F01ORF771P |
| 772 | bacteriophage replication gene A | |||
| 3184 | Phage O protein | |||
| 3185 | M | M1.Sen2528ORF9580P (100% identity) | GATC | M.Sen23F01ORF3185P |
| 3186 | DNA (Cytosine-5-)-methyltransferase | |||
| 3185 | DNA methyltransferase | |||
| 3186 | M | M2.SenUA36ORF1996P (99% identity) | M.Sen23F01ORF3186P | |
| 3187 | Crossover junction endodeoxyribonuclease rusA | |||
| 1565 | 670 aa hypothetical protein | |||
| 1566 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen23F01ORF1566P |
| 1567 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2374 | cyanide-insensitive oxidase CioA | |||
| 2375 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen23F01ORF2376P |
| 2376 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen23F01ORF2376P |
| 2377 | major facilitator superfamily MFS_1 | |||