Salmonella enterica subsp. enterica serovar Agona 24.H.04 |
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Putative Salmonella enterica subsp. enterica serovar Agona 24.H.04 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,821,075 bp
GenBank #: CASR00000000 (NZ_CASR00000000)
REBASE acronym: Sen24H04
Org_num: 16219
All begin SA24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2365 | filamentation induced by cAMP protein Fic | |||
| 2366 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen24H04ORF2368P |
| 2367 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen24H04ORF2368P |
| 2368 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen24H04ORF2368P |
| 2369 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen24H04ORF2368P |
| 2370 | protein TIR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4241 | unnamed protein product | |||
| 4242 | M | M.SspW3ORF4074P (100% identity) | CTGCAG | M.Sen24H04ORF4242P |
| 4243 | R | SkhJW44ORF21540P (100% identity) | CTGCAG | Sen24H04ORF4242P |
| 4244 | Phage integrase family protein | |||
| 1862 | metal dependent phosphohydrolase | |||
| 1863 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen24H04DcmP |
| 1864 | V | very short patch repair protein | V.Sen24H04DcmP | |
| 1865 | carboxylate/amino acid/amine transporter | |||
| 4337 | periplasmic protein | |||
| 4338 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen24H04ORF4338P |
| 4339 | DNA-binding protein Fis | |||
| 4652 | protein DamX | |||
| 4653 | M | M.StyTDamP (100% identity) | GATC | M.Sen24H04DamP |
| 4654 | ribulose-phosphate 3-epimerase | |||
| 1238 | DksA/TraR family C4-type zinc finger protein | |||
| 1239 | M | M.SenSA5ORF21849P (100% identity) | GATC | M.Sen24H04ORF1239P |
| 1240 | bacteriophage replication gene A | |||
| 2384 | 670 aa hypothetical protein | |||
| 2385 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen24H04ORF2385P |
| 2386 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 798 | cyanide-insensitive oxidase CioA | |||
| 799 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen24H04ORF800P |
| 800 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen24H04ORF800P |
| 801 | major facilitator superfamily MFS_1 | |||