Salmonella enterica subsp. enterica serovar Agona 33.A.05 |
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Putative Salmonella enterica subsp. enterica serovar Agona 33.A.05 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,719,509 bp
GenBank #: CASL00000000 (NZ_CASL00000000)
REBASE acronym: Sen33A05
Org_num: 16214
All begin SA33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4057 | protein TIR | |||
| 4058 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen33A05ORF4058P |
| 4059 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen33A05ORF4058P |
| 4060 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen33A05ORF4058P |
| 4061 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen33A05ORF4058P |
| 4062 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4041 | 97 aa hypothetical protein | |||
| 4042 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen33A05ORF4042P |
| 4043 | 670 aa hypothetical protein | |||
| 1640 | periplasmic protein | |||
| 1641 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33A05ORF1641P |
| 1642 | DNA-binding protein Fis | |||
| 4561 | protein DamX | |||
| 4562 | M | M.StyTDamP (100% identity) | GATC | M.Sen33A05DamP |
| 4563 | ribulose-phosphate 3-epimerase | |||
| 1317 | carboxylate/amino acid/amine transporter | |||
| 1318 | V | V.StyUK1DcmP (100% identity) | V.Sen33A05DcmP | |
| 1319 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen33A05DcmP |
| 1320 | metal dependent phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2272 | cyanide-insensitive oxidase CioA | |||
| 2273 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen33A05ORF2274P |
| 2274 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen33A05ORF2274P |
| 2275 | major facilitator superfamily MFS_1 | |||