Salmonella enterica subsp. enterica serovar Agona 34.H.09 |
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Putative Salmonella enterica subsp. enterica serovar Agona 34.H.09 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,780,605 bp
GenBank #: CASK00000000 (NZ_CASK00000000)
REBASE acronym: Sen34H09
Org_num: 16213
All begin SA34_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4197 | protein TIR | |||
| 4198 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen34H09ORF4198P |
| 4199 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen34H09ORF4198P |
| 4200 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen34H09ORF4198P |
| 4201 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen34H09ORF4198P |
| 4202 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4181 | 97 aa hypothetical protein | |||
| 4182 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen34H09ORF4182P |
| 4183 | 670 aa hypothetical protein | |||
| 2208 | metal dependent phosphohydrolase | |||
| 2209 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen34H09DcmP |
| 2210 | V | V.StyUK1DcmP (100% identity) | V.Sen34H09DcmP | |
| 2211 | carboxylate/amino acid/amine transporter | |||
| 4647 | ribulose-phosphate 3-epimerase | |||
| 4648 | M | M.StyTDamP (100% identity) | GATC | M.Sen34H09DamP |
| 4649 | protein DamX | |||
| 3948 | periplasmic protein | |||
| 3949 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen34H09ORF3949P |
| 3950 | DNA-binding protein Fis | |||
| 4359 | prophage lipoprotein | |||
| 4360 | M | M.SglORF828P (100% identity) | M.Sen34H09ORF4360P | |
| 4361 | Uncharacterized protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 322 | major facilitator superfamily MFS_1 | |||
| 323 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen34H09ORF323P |
| 324 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen34H09ORF323P |
| 325 | cyanide-insensitive oxidase CioA | |||