Salmonella enterica subsp. enterica serovar Agona 35.H.08 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Agona 35.H.08 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,747,387 bp
GenBank #: CASJ00000000 (NZ_CASJ00000000)
REBASE acronym: Sen35H08
Org_num: 16212
All begin SA35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4006 | protein TIR | |||
| 4007 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen35H08ORF4007P |
| 4008 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen35H08ORF4007P |
| 4009 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen35H08ORF4007P |
| 4010 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen35H08ORF4007P |
| 4011 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3990 | 97 aa hypothetical protein | |||
| 3991 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen35H08ORF3991P |
| 3992 | 670 aa hypothetical protein | |||
| 2173 | metal dependent phosphohydrolase | |||
| 2174 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen35H08DcmP |
| 2175 | V | V.StyUK1DcmP (100% identity) | V.Sen35H08DcmP | |
| 2176 | carboxylate/amino acid/amine transporter | |||
| 2806 | periplasmic protein | |||
| 2807 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen35H08ORF2807P |
| 2808 | DNA-binding protein Fis | |||
| 4686 | protein DamX | |||
| 4687 | M | M.StyTDamP (100% identity) | GATC | M.Sen35H08DamP |
| 4688 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1075 | major facilitator superfamily MFS_1 | |||
| 1076 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen35H08ORF1076P |
| 1077 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen35H08ORF1076P |
| 1078 | cyanide-insensitive oxidase CioA | |||