Salmonella enterica subsp. enterica serovar Agona 37.F.02 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Agona 37.F.02 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,730,885 bp
GenBank #: CASH00000000 (NZ_CASH00000000)
REBASE acronym: Sen37F02
Org_num: 16210
All begin SA37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3511 | protein TIR | |||
| 3512 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen37F02ORF3512P |
| 3513 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen37F02ORF3512P |
| 3514 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen37F02ORF3512P |
| 3515 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen37F02ORF3512P |
| 3516 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3495 | 97 aa hypothetical protein | |||
| 3496 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen37F02ORF3496P |
| 3497 | 670 aa hypothetical protein | |||
| 1115 | metal dependent phosphohydrolase | |||
| 1116 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen37F02DcmP |
| 1117 | V | V.StyUK1DcmP (100% identity) | V.Sen37F02DcmP | |
| 1118 | carboxylate/amino acid/amine transporter | |||
| 4425 | ribulose-phosphate 3-epimerase | |||
| 4426 | M | M.StyTDamP (100% identity) | GATC | M.Sen37F02DamP |
| 4427 | protein DamX | |||
| 1466 | periplasmic protein | |||
| 1467 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen37F02ORF1467P |
| 1468 | DNA-binding protein Fis | |||
| 568 | DksA/TraR family C4-type zinc finger protein | |||
| ??? | M | M.Sen38O03ORFAP (100% identity) | GATC | M.Sen37F02ORFAP |
| 569 | bacteriophage replication gene A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1902 | cyanide-insensitive oxidase CioA | |||
| 1903 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen37F02ORF1904P |
| 1904 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen37F02ORF1904P |
| 1905 | major facilitator superfamily MFS_1 | |||