Salmonella enterica subsp. enterica serovar Agona 38.O.03 |
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Putative Salmonella enterica subsp. enterica serovar Agona 38.O.03 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,735,345 bp
GenBank #: CASG00000000 (NZ_CASG00000000)
REBASE acronym: Sen38O03
Org_num: 16232
All begin SA38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3535 | protein TIR | |||
| 3536 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen38O03ORF3536P |
| 3537 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen38O03ORF3536P |
| 3538 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen38O03ORF3536P |
| 3539 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen38O03ORF3536P |
| 3540 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3519 | 97 aa hypothetical protein | |||
| 3520 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen38O03ORF3520P |
| 3521 | hypothetical protein | |||
| 2065 | metal dependent phosphohydrolase | |||
| 2066 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen38O03DcmP |
| 2067 | V | V.StyUK1DcmP (100% identity) | V.Sen38O03DcmP | |
| 2068 | carboxylate/amino acid/amine transporter | |||
| 2440 | periplasmic protein | |||
| 2441 | M | M.StyUK1III (90% identity) | ATGCAT | M.Sen38O03ORF2441P |
| 2442 | DNA-binding protein Fis | |||
| 4637 | bacteriophage replication gene A | |||
| ??? | M | M.Sen37F02ORFAP (100% identity) | GATC | M.Sen38O03ORFAP |
| 4638 | DksA/TraR family C4-type zinc finger protein | |||
| 1956 | protein DamX | |||
| 1957 | M | M.StyTDamP (100% identity) | GATC | M.Sen38O03DamP |
| 1958 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2620 | major facilitator superfamily MFS_1 | |||
| 2621 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen38O03ORF2621P |
| 2622 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen38O03ORF2621P |
| 2623 | cyanide-insensitive oxidase CioA | |||