Salmonella enterica subsp. enterica serovar Agona 44.E.09 |
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Putative Salmonella enterica subsp. enterica serovar Agona 44.E.09 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,733,883 bp
GenBank #: CASB00000000 (NZ_CASB00000000)
REBASE acronym: Sen44E09
Org_num: 16285
All begin SA44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2093 | protein TIR | |||
| 2094 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen44E09ORF2094P |
| 2095 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen44E09ORF2094P |
| 2096 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen44E09ORF2094P |
| 2097 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen44E09ORF2094P |
| 2098 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4362 | M | M.StyTDamP (100% identity) | GATC | M.Sen44E09DamP |
| 4363 | ribulose-phosphate 3-epimerase | |||
| 2077 | 97 aa hypothetical protein | |||
| 2078 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen44E09ORF2078P |
| 2079 | 670 aa hypothetical protein | |||
| 3377 | metal dependent phosphohydrolase | |||
| 3378 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen44E09DcmP |
| 3379 | V | V.StyUK1DcmP (100% identity) | V.Sen44E09DcmP | |
| 3380 | carboxylate/amino acid/amine transporter | |||
| 708 | periplasmic protein | |||
| 709 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen44E09ORF709P |
| 710 | DNA-binding protein Fis | |||
| 2276 | pbsx family phage portal protein | |||
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen44E09ORF2278P |
| 2278 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen44E09ORF2278P |
| 2279 | 62 aa hypothetical protein | |||
| 2280 | bacteriophage replication gene A | |||
| 2281 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen44E09ORF2281P |
| 2282 | 113 aa hypothetical protein | |||
| 2491 | Gp51 family protein | |||
| 2492 | M | M.Sen76333ORF16870P (94% identity) | GATC | M.Sen44E09ORF2492P |
| 2493 | uncharacterized protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4095 | major facilitator superfamily MFS_1 | |||
| 4096 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen44E09ORF4096P |
| ??? | R | SenSA5ORF13013P (97% identity) | CAGAG | Sen44E09ORF4096P |
| 4098 | cyanide-insensitive oxidase CioA | |||