Salmonella enterica subsp. enterica serovar Agona 45.E.09 |
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Putative Salmonella enterica subsp. enterica serovar Agona 45.E.09 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,734,205 bp
GenBank #: CASA00000000 (NZ_CASA00000000)
REBASE acronym: Sen45E09
Org_num: 16284
All begin SA45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2805 | protein TIR | |||
| 2806 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen45E09ORF2806P |
| 2807 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen45E09ORF2806P |
| 2808 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen45E09ORF2806P |
| 2809 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen45E09ORF2806P |
| 2810 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2789 | 97 aa hypothetical protein | |||
| 2790 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen45E09ORF2790P |
| 2791 | 670 aa hypothetical protein | |||
| 3754 | metal dependent phosphohydrolase | |||
| 3755 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen45E09DcmP |
| 3756 | V | V.StyUK1DcmP (100% identity) | V.Sen45E09DcmP | |
| 3757 | carboxylate/amino acid/amine transporter | |||
| 4378 | ribulose-phosphate 3-epimerase | |||
| 4379 | M | M.StyTDamP (100% identity) | GATC | M.Sen45E09DamP |
| 1136 | periplasmic protein | |||
| 1137 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen45E09ORF1137P |
| 1138 | DNA-binding protein Fis | |||
| 4596 | Gp51 family protein | |||
| 4597 | M | M.Sen76333ORF16870P (94% identity) | GATC | M.Sen45E09ORF4597P |
| 4598 | uncharacterized protein | |||
| 542 | 113 aa hypothetical protein | |||
| 543 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen45E09ORF543P |
| 544 | bacteriophage replication gene A | |||
| 545 | 62 aa hypothetical protein | |||
| 546 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen45E09ORF546P |
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen45E09ORF546P |
| 548 | pbsx family phage portal protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4100 | cyanide-insensitive oxidase CioA | |||
| 4101 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen45E09ORF4102P |
| 4102 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen45E09ORF4102P |
| 4103 | major facilitator superfamily MFS_1 | |||