Salmonella enterica subsp. enterica serovar Agona 50.E.08 |
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Putative Salmonella enterica subsp. enterica serovar Agona 50.E.08 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,741,183 bp
GenBank #: CARX00000000 (NZ_CARX00000000)
REBASE acronym: Sen50E08
Org_num: 16283
All begin SA50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4321 | filamentation induced by cAMP protein Fic | |||
| 4322 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen50E08ORF4324P |
| 4323 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen50E08ORF4324P |
| 4324 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen50E08ORF4324P |
| 4325 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen50E08ORF4324P |
| 4326 | protein TIR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4673 | Gp51 family protein | |||
| 4674 | M | M.Sen76333ORF16870P (94% identity) | GATC | M.Sen50E08ORF4674P |
| 4675 | uncharacterized protein | |||
| 4464 | protein DamX | |||
| 4465 | M | M.StyTDamP (100% identity) | GATC | M.Sen50E08DamP |
| 4466 | ribulose-phosphate 3-epimerase | |||
| 2082 | DNA-binding protein Fis | |||
| 2083 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen50E08ORF2083P |
| 2084 | periplasmic protein | |||
| 1450 | carboxylate/amino acid/amine transporter | |||
| 1451 | V | V.StyUK1DcmP (100% identity) | V.Sen50E08DcmP | |
| 1452 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen50E08DcmP |
| 1453 | metal dependent phosphohydrolase | |||
| 341 | 113 aa hypothetical protein | |||
| 342 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen50E08ORF342P |
| 343 | bacteriophage replication gene A | |||
| 4340 | 670 aa hypothetical protein | |||
| 4341 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen50E08ORF4341P |
| 4342 | 97 aa hypothetical protein | |||
| 344 | 62 aa hypothetical protein | |||
| 345 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen50E08ORF345P |
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen50E08ORF345P |
| 347 | pbsx family phage portal protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3171 | cyanide-insensitive oxidase CioA | |||
| 3172 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen50E08ORF3173P |
| 3173 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen50E08ORF3173P |
| 3174 | major facilitator superfamily MFS_1 | |||