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Putative Salmonella enterica subsp. enterica serovar Agona 55.U.08 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,708,322 bp
GenBank #: CARS00000000 (NZ_CARS00000000)
REBASE acronym: Sen55U08
Org_num: 16191
All begin SA55_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2694 | filamentation induced by cAMP protein Fic | |||
2695 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen55U08ORF2697P |
2696 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen55U08ORF2697P |
2697 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen55U08ORF2697P |
2698 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen55U08ORF2697P |
2699 | protein TIR | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
4202 | periplasmic protein | |||
4203 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen55U08ORF4203P |
4204 | DNA-binding protein Fis | |||
4595 | protein DamX | |||
4596 | M | M.StyTDamP (100% identity) | GATC | M.Sen55U08DamP |
4597 | ribulose-phosphate 3-epimerase | |||
61 | 113 aa hypothetical protein | |||
62 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen55U08ORF62P |
63 | bacteriophage replication gene A | |||
64 | 62 aa hypothetical protein | |||
65 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen55U08ORF65P |
??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen55U08ORF65P |
67 | pbsx family phage portal protein | |||
2713 | 670 aa hypothetical protein | |||
2714 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen55U08ORF2714P |
2715 | 97 aa hypothetical protein | |||
2489 | carboxylate/amino acid/amine transporter | |||
2490 | V | V.StyUK1DcmP (100% identity) | V.Sen55U08DcmP | |
2491 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen55U08DcmP |
2492 | metal dependent phosphohydrolase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
315 | major facilitator superfamily MFS_1 | |||
316 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen55U08ORF316P |
317 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen55U08ORF316P |
318 | cyanide-insensitive oxidase CioA |