Salmonella enterica subsp. enterica serovar Agona 60.O.08 |
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Putative Salmonella enterica subsp. enterica serovar Agona 60.O.08 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,707,979 bp
GenBank #: CARO00000000 (NZ_CARO00000000)
REBASE acronym: Sen60O08
Org_num: 16188
All begin SA60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3826 | filamentation induced by cAMP protein Fic | |||
| 3827 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen60O08ORF3829P |
| 3828 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen60O08ORF3829P |
| 3829 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen60O08ORF3829P |
| 3830 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen60O08ORF3829P |
| 3831 | protein TIR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2041 | metal dependent phosphohydrolase | |||
| 2042 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen60O08DcmP |
| 2043 | V | V.StyUK1DcmP (100% identity) | V.Sen60O08DcmP | |
| 2044 | hypothetical protein | |||
| 2403 | periplasmic protein | |||
| 2404 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen60O08ORF2404P |
| 2405 | DNA-binding protein Fis | |||
| 1066 | pbsx family phage portal protein | |||
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen60O08ORF1068P |
| 1068 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen60O08ORF1068P |
| 1069 | 62 aa hypothetical protein | |||
| 3918 | protein DamX | |||
| 3919 | M | M.StyTDamP (100% identity) | GATC | M.Sen60O08DamP |
| 3920 | ribulose-phosphate 3-epimerase | |||
| 1070 | bacteriophage replication gene A | |||
| 1071 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen60O08ORF1071P |
| 1072 | 113 aa hypothetical protein | |||
| 3845 | 670 aa hypothetical protein | |||
| 3846 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen60O08ORF3846P |
| 3847 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3324 | cyanide-insensitive oxidase CioA | |||
| 3325 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen60O08ORF3326P |
| 3326 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen60O08ORF3326P |
| 3327 | major facilitator superfamily MFS_1 | |||