Salmonella enterica subsp. enterica serovar Agona 62.H.72 |
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Putative Salmonella enterica subsp. enterica serovar Agona 62.H.72 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,734,746 bp
GenBank #: CARM00000000 (NZ_CARM00000000)
REBASE acronym: Sen62H72
Org_num: 16186
All begin SA62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1263 | filamentation induced by cAMP protein Fic | |||
| 1264 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen62H72ORF1266P |
| 1265 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen62H72ORF1266P |
| 1266 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen62H72ORF1266P |
| 1267 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen62H72ORF1266P |
| 1268 | protein TIR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4417 | ribulose-phosphate 3-epimerase | |||
| 4418 | M | M.StyTDamP (100% identity) | GATC | M.Sen62H72DamP |
| 4419 | protein DamX | |||
| 4308 | DNA-binding protein Fis | |||
| 4309 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen62H72ORF4309P |
| 4310 | periplasmic protein | |||
| 1282 | 651 aa hypothetical protein | |||
| 1283 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen62H72ORF1283P |
| 1284 | 97 aa hypothetical protein | |||
| 1788 | carboxylate/amino acid/amine transporter | |||
| 1789 | V | V.StyUK1DcmP (100% identity) | V.Sen62H72DcmP | |
| 1790 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen62H72DcmP |
| 1791 | metal dependent phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2997 | major facilitator superfamily MFS_1 | |||
| 2998 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen62H72ORF2998P |
| 2999 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen62H72ORF2998P |
| 3000 | cyanide-insensitive oxidase CioA | |||