Salmonella enterica subsp. enterica serovar Agona 64.H.00 |
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Putative Salmonella enterica subsp. enterica serovar Agona 64.H.00 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,770,350 bp
GenBank #: CARK00000000 (NZ_CARK00000000)
REBASE acronym: Sen64H
Org_num: 16184
All begin SA64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3711 | protein TIR | |||
| 3712 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen64HORF3712P |
| 3713 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen64HORF3712P |
| 3714 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen64HORF3712P |
| 3715 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen64HORF3712P |
| 3716 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3695 | 97 aa hypothetical protein | |||
| 3696 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen64HORF3696P |
| 3697 | 670 aa hypothetical protein | |||
| 4607 | ribulose-phosphate 3-epimerase | |||
| 4608 | M | M.StyTDamP (100% identity) | GATC | M.Sen64HDamP |
| 4609 | protein DamX | |||
| 2511 | periplasmic protein | |||
| 2512 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen64HORF2512P |
| 2513 | DNA-binding protein Fis | |||
| 2401 | carboxylate/amino acid/amine transporter | |||
| 2402 | V | V.StyUK1DcmP (100% identity) | V.Sen64HDcmP | |
| 2403 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen64HDcmP |
| 2404 | metal dependent phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 699 | major facilitator superfamily MFS_1 | |||
| 700 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen64HORF700P |
| 701 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen64HORF700P |
| 702 | cyanide-insensitive oxidase CioA | |||