Salmonella enterica subsp. enterica serovar Agona 66.F.99 |
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Putative Salmonella enterica subsp. enterica serovar Agona 66.F.99 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,769,813 bp
GenBank #: CARI00000000 (NZ_CARI00000000)
REBASE acronym: SenF99
Org_num: 16182
All begin SA66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3336 | protein TIR | |||
| 3337 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.SenF99ORF3337P |
| 3338 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.SenF99ORF3337P |
| 3339 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.SenF99ORF3337P |
| 3340 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | SenF99ORF3337P |
| 3341 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3320 | 97 aa hypothetical protein | |||
| 3321 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.SenF99ORF3321P |
| 3322 | 670 aa hypothetical protein | |||
| 1297 | periplasmic protein | |||
| 1298 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenF99ORF1298P |
| 1299 | DNA-binding protein Fis | |||
| 4358 | protein DamX | |||
| 4359 | M | M.StyTDamP (100% identity) | GATC | M.SenF99DamP |
| 4360 | ribulose-phosphate 3-epimerase | |||
| 3622 | Protein ninF | |||
| 3623 | M | M.Sens24230ORF16970P (100% identity) | GATC | M.SenF99ORF3623P |
| 3624 | DNA replication protein gp18 | |||
| 4009 | carboxylate/amino acid/amine transporter | |||
| 4010 | V | V.StyUK1DcmP (100% identity) | V.SenF99DcmP | |
| 4011 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.SenF99DcmP |
| 4012 | metal dependent phosphohydrolase | |||
| 292 | DksA/TraR family C4-type zinc finger protein | |||
| 293 | M | M.SenSA5ORF21849P (100% identity) | GATC | M.SenF99ORF293P |
| 294 | bacteriophage replication gene A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2154 | cyanide-insensitive oxidase CioA | |||
| 2155 | R | SenSA5ORF13013P (100% identity) | CAGAG | SenF99ORF2156P |
| 2156 | M | M.StyTORF2507P (100% identity) | CAGAG | M.SenF99ORF2156P |
| 2157 | major facilitator superfamily MFS_1 | |||