Salmonella enterica subsp. enterica serovar Agona 72.A.52 |
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Putative Salmonella enterica subsp. enterica serovar Agona 72.A.52 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,703,689 bp
GenBank #: CARC00000000 (NZ_CARC00000000)
REBASE acronym: Sen72A52
Org_num: 16178
All begin SA72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3364 | protein TIR | |||
| 3365 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen72A52ORF3365P |
| 3366 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen72A52ORF3365P |
| 3367 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen72A52ORF3365P |
| 3368 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen72A52ORF3365P |
| 3369 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3348 | 97 aa hypothetical protein | |||
| 3349 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen72A52ORF3349P |
| 3350 | 670 aa hypothetical protein | |||
| 3191 | ribulose-phosphate 3-epimerase | |||
| 3192 | M | M.StyTDamP (100% identity) | GATC | M.Sen72A52DamP |
| 3193 | protein DamX | |||
| 1308 | periplasmic protein | |||
| 1309 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen72A52ORF1309P |
| 1310 | DNA-binding protein Fis | |||
| 1530 | bacteriophage replication gene A | |||
| 1531 | M | M.Sen71E05ORF4648P (100% identity) | M.Sen72A52ORF1531P | |
| 1532 | retron EC67 DNA adenine methylase | |||
| 1531 | Methyltransferase, putative | |||
| 1532 | M | M.Sen71E05ORF4647P (100% identity) | GATC | M.Sen72A52ORF1532P |
| 1533 | DksA/TraR family C4-type zinc finger protein | |||
| 243 | carboxylate/amino acid/amine transporter | |||
| 244 | V | V.StyUK1DcmP (100% identity) | V.Sen72A52DcmP | |
| 245 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen72A52DcmP |
| 246 | metal dependent phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2925 | cyanide-insensitive oxidase CioA | |||
| 2926 | R | SenWORF340P (100% identity) | CAGAG | Sen72A52ORF2927P |
| 2927 | M | M.Sen71E05ORF703P (100% identity) | CAGAG | M.Sen72A52ORF2927P |
| 2928 | major facilitator superfamily MFS_1 | |||