Salmonella enterica subsp. enterica serovar Agona 419639 2-1 |
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Putative Salmonella enterica subsp. enterica serovar Agona 419639 2-1 RM systems
Ref: Timme,R.E. et al. Genome Biol Evol 5 (11), 2109-2123 (2013)
REBASE ref # 17417
Contig set: 4,820,311 bp
GenBank #: AOZV00000000 (NZ_AOZV00000000)
REBASE acronym: Sen392
Org_num: 16137
All begin SEEA3921_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22822 | TIR protein | |||
| 22827 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen392ORF22827P |
| ??? | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen392ORF22827P |
| 22837 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen392ORF22827P |
| 22842 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen392ORF22827P |
| 22847 | 310 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22757 | 97 aa hypothetical protein | |||
| ??? | M | M.SenSA4ORF4931P (100% identity) | CAGCTG | M.Sen392ORF22762P |
| 22767 | 670 aa hypothetical protein | |||
| 11045 | ribulose-phosphate 3-epimerase | |||
| 11050 | M | M.StyTDamP (100% identity) | GATC | M.Sen392DamP |
| 11055 | cell division protein DamX | |||
| 15605 | 380 aa hypothetical protein | |||
| 15610 | R | SspS13ORF1655P (100% identity) | GTCGAC | Sen392ORF15615P |
| 15615 | M | M.SspS13ORF1655P (100% identity) | GTCGAC | M.Sen392ORF15615P |
| 15620 | replication protein A | |||
| 17235 | replication protein for prophage | |||
| 17240 | M | M.SenS0722ORF17610P (100% identity) | GATC | M.Sen392ORF17240P |
| 17245 | DksA/TraR protein family with a zinc | |||
| 1057 | hydrolase | |||
| 1062 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen392DcmP |
| 1067 | V | V.StyUK1DcmP (100% identity) | V.Sen392DcmP | |
| 1072 | DMT superfamily transporter inner | |||
| 10432 | DNA-binding protein Fis | |||
| 10437 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen392ORF10437P |
| 10442 | 54 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9001 | 33 aa hypothetical protein | |||
| 9006 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen392ORF9011P |
| 9011 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen392ORF9011P |
| 9016 | major facilitator superfamily MFS 1 | |||