Myxococcus species (contaminant ex DSM 436) |
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Putative Myxococcus species (contaminant ex DSM 436) RM systems
Ref: Sharma,G. et al. unpublished
REBASE ref # 19983
Complete sequence: 9,490,432 bp
GenBank #: CP012109
REBASE acronym: Msp436
Org_num: 16093
All begin A176_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5079 | metal-dependent hydrolase | |||
| 5080 | R | MxaGH35ORF9095P (94% identity) | CCANNNNNNGTAG | Msp436IP |
| 5081 | S | S.CgiWM02ORF790P (44% identity) | CCANNNNNNGTAG | S.Msp436I |
| 5082 | M | M.MxaGH35ORF9095P (69% identity) | CCANNNNNNGTAG | M.Msp436I |
| 5083 | 250 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1736 | LSU ribosomal protein L31p | |||
| 1737 | M | M.MxaZ2I (97% identity) | GATC | M.Msp436ORF1737P |
| 1738 | Aminopeptidase | |||
| 2041 | 575 aa hypothetical protein | |||
| 2042 | M | M.MxaZ2ORF10300P (21% identity) | AAGCTT | M.Msp436ORF2042BP |
| 2043 | M | M.MxaKF43ORF15540P (29% identity) | AAGCTT | M.Msp436ORF2042AP |
| 2044 | DNA primase domain protein | |||
| 3423 | 139 aa hypothetical protein | |||
| 3424 | M | M.MfuHW1ORF18415P (82% identity) | GATC | M.Msp436ORF3424P |
| 3425 | 70 aa hypothetical protein | |||
| 4901 | Superfamily II DNA and RNA helicase | |||
| 4902 | RM | PspA002ORF28020P (90% identity) | Msp436ORF4902P | |
| 4903 | Helicase domain protein | |||
| 5114 | ATP binding protein | |||
| 5115 | RM | MfuHW1ORF13255P (63% identity) | Msp436ORF5115P | |
| 5116 | Superfamily II DNA/RNA helicase, SNF2 family | |||
| 5273 | 166 aa hypothetical protein | |||
| 5274 | V | Very-short-patch mismatch repair endonuclease | V.Msp436ORF5275P | |
| 5275 | M | M.LcaX23ORFCP (46% identity) | CCGCGG | M.Msp436ORF5275P |
| 5276 | Mobile element protein | |||