Escherichia coli PCN061 |
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Putative Escherichia coli PCN061 RM systems
Ref: Liu,C. et al. unpublished
REBASE ref # 19766
| Sequence length: | GenBank #: | |
| Chromosome: | 4,603,777 bp | CP006636 |
| plasmid PCN061p5: | 103,644 bp | CP006641 |
| plasmid PCN061p6: | 145,722 bp | CP006642 |
REBASE acronym: Eco061
Org_num: 15733
All begin PCN061_, PCN061_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 317 | IS5 transposase and trans-activator | |||
| 318 | R | Sso8ORF17680P (99% identity) | Eco061ORF320P | |
| 319 | S | S.EcosNDM5ORF17455P (100% identity) | S.Eco061ORF320P | |
| 320 | M | M.Sso8ORF17680P (100% identity) | M.Eco061ORF320P | |
| 321 | ATP/GTP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 261 | 67 aa hypothetical protein | |||
| 262 | M | M.Eco4012ORF18195P (99% identity) | M.Eco061ORF262P | |
| 263 | Holin | |||
| 2019 | inner membrane protein | |||
| 2020 | V | V.SflSTLE1DcmP (100% identity) | V.Eco061DcmP | |
| 2021 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco061DcmP |
| 2022 | hydrolase, HD superfamily | |||
| 2041 | 280 aa hypothetical protein | |||
| 2042 | M | M.Ecow264ORF8950P (100% identity) | GATC | M.Eco061ORF2042P |
| 2043 | 150 aa hypothetical protein | |||
| 3343 | DNA-binding protein Fis | |||
| 3344 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco061ORF3344P |
| 3345 | membrane protein | |||
| 3470 | ribulose-phosphate 3-epimerase | |||
| 3471 | M | DNA adenine methylase | GATC | M.Eco061DamP |
| 3472 | DamX protein | |||
| plasmid PCN061p5 | ||||
| 5051 | Uncharacterized protein YubC | |||
| 5052 | M | M.StyR64ORFAP (100% identity) | M.Eco061ORF5052P | |
| 5053 | Uncharacterized protein YubE | |||
| plasmid PCN061p6 | ||||
| 6032 | IS1 transposase | |||
| 6033 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Eco061ORF6033P |
| 6034 | R | Ssp3CORF24390P (100% identity) | CCWGG | Eco061ORF6033P |
| 6035 | 181 aa hypothetical protein | |||
| 6114 | 905 aa hypothetical protein | |||
| 6115 | RM | KmiKO408ORF30410P (100% identity) | Eco061ORF6115P | |
| 6116 | 587 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 295 | DNA-invertase | |||
| 296 | R | SflFF80GmrDP (37% identity) | Eco061GmrDP | |
| 297 | 370 aa hypothetical protein | |||