Burkholderia pyrrocinia DSM 10685 |
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Putative Burkholderia pyrrocinia DSM 10685 RM systems
Ref: Kwak,Y. and Shin,J.-H. unpublished
REBASE ref # 18373
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,584,103 bp | CP011503 |
| chromosome 2: | 3,214,754 bp | CP011504 |
| plasmid p2327: | 113,484 bp | CP011506 |
REBASE acronym: Bpy10685
Org_num: 15780
All begin ABD05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 6075 | transposase | |||
| 6080 | R | PspSOS3ORF1710P (33% identity) | Bpy10685ORF6080P | |
| 6085 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5730 | phenylacetic acid degradation protein | |||
| 5740 | M | M.Psy457ORF24430P (52% identity) | M1.Bpy10685ORF5740P | |
| 5745 | 384 aa hypothetical protein | |||
| ??? | M | DNA methylase N-4/N-6 domain protein | M2.Bpy10685ORF5740P | |
| 5750 | 349 aa hypothetical protein | |||
| 5940 | transcriptional regulator | |||
| 5945 | M | M.Rps9673ORF10625P (97% identity) | M.Bpy10685ORF5945P | |
| 5950 | V | V.PveR4ORFCP (82% identity) | V.Bpy10685ORF5945P | |
| 5955 | helicase | |||
| 5960 | 674 aa hypothetical protein | |||
| 5965 | RM | Pspb193ORF24025P (82% identity) | Bpy10685ORF5965P | |
| 5970 | 624 aa hypothetical protein | |||
| chromosome 2 | ||||
| 16825 | tryptophan synthase alpha chain | |||
| 16830 | M | M.Bpy6ORF24100P (100% identity) | GTWWAC | M.Bpy10685ORF16830P |
| 16835 | tryptophan synthase subunit alpha | |||
| plasmid p2327 | ||||
| 34875 | integrase | |||
| 34880 | M | M.Bce318ORF12995P (83% identity) | CTGCAG | M.Bpy10685ORF34880P |
| 34885 | R | Bce318ORF12995P (78% identity) | CTGCAG | Bpy10685ORF34880P |
| 34890 | 878 aa hypothetical protein | |||
| 34980 | 153 aa hypothetical protein | |||
| 34985 | M | M.BpsR44ORF5950P (100% identity) | M.Bpy10685ORF34985P | |
| 34990 | 168 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 6180 | glycine zipper 2TM domain protein | |||
| 6185 | R | BstLA20WORFBP (62% identity) | CACAG | Bpy10685ORF6190P |
| 6190 | M | M.Bpy6ORF16390P (99% identity) | CACAG | M.Bpy10685ORF6190P |
| 6195 | porin | |||