Pseudomonas stutzeri YC-YH1 |
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Putative Pseudomonas stutzeri YC-YH1 RM systems
Ref: Shi,Y.H. et al. Genome Announc 3 (2) (2015)
REBASE ref # 19555
Contig set: 4,798,133 bp
GenBank #: JUDR00000000 (NZ_JUDR00000000)
REBASE acronym: PstYH1
Org_num: 15656
All begin QX25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2835 | XRE family transcriptional regulator | |||
| 2840 | R | PaeDQ8ORFBP (98% identity) | PstYH1ORF2850P | |
| 2845 | S | S.Mth10ORFMP (43% identity) | S.PstYH1ORF2850P | |
| 2850 | M | M.PbaLS401ORF18675P (97% identity) | M.PstYH1ORF2850P | |
| 2855 | 120 aa hypothetical protein | |||
| 20545 | ATP-dependent OLD family endonuclease | |||
| 20550 | S | S.Pst716ORFFP (62% identity) | S.PstYH1ORF20555P | |
| 20555 | M | M.Pst716ORFFP (100% identity) | M.PstYH1ORF20555P | |
| 20560 | R | Pst716ORFFP (100% identity) | PstYH1ORF20555P | |
| 20565 | ATPase AAA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16755 | 435 aa hypothetical protein | |||
| 16760 | M | M.PstMN1ORF22540P (80% identity) | M.PstYH1ORF16760P | |
| 16765 | 335 aa hypothetical protein | |||
| 16880 | 64 aa hypothetical protein, partial | |||
| 16885 | RM | Pst716ORFEP (100% identity) | PstYH1ORF16885P | |
| 16890 | 247 aa hypothetical protein | |||
| 19230 | transposase | |||
| 19235 | M | M.Psp21036ORF1370P (85% identity) | M.PstYH1ORF19235P | |
| 19240 | superfamily I DNA/RNA helicase | |||
| 10030 | helicase UvrD | |||
| ??? | RM | PstJ15ORF6135P (99% identity) | PstYH1ORF10035P | |
| 10045 | 602 aa hypothetical protein | |||
| 5235 | 185 aa hypothetical protein | |||
| 5240 | M | M.VspWDL1ORF4337P (96% identity) | M.PstYH1ORF5240P | |
| 5245 | DNA topoisomerase III | |||
| 10485 | XRE family transcriptional regulator | |||
| 10490 | RM | PspMT1ORF3057P (99% identity) | PstYH1ORF10490P | |
| 10495 | DEAD/DEAH box helicase | |||