Burkholderia pseudomallei A79D |
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Putative Burkholderia pseudomallei A79D RM systems
Ref: Johnson,S.L. et al. Genome Announc 3 (1) (2015)
REBASE ref # 19046
Contig set: 7,165,130 bp
GenBank #: JQHR00000000 (NZ_JQHR00000000)
REBASE acronym: BpsA79D
Org_num: 14938
All begin Y023_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5254 | 242 aa hypothetical protein | |||
| 5255 | R | BpssB03ORFEP (100% identity) | BpsA79DORF5259P | |
| 5256 | 43 aa hypothetical protein | |||
| 5257 | 85 aa hypothetical protein | |||
| 5258 | restriction modification system DNA specificity | |||
| 5259 | M | M.BpssB03ORFEP (91% identity) | M.BpsA79DORF5259P | |
| 5260 | 77 aa hypothetical protein | |||
| 331 | 661 aa hypothetical protein | |||
| 332 | M | M.BpssB03ORFBP (100% identity) | M.BpsA79DORF332P | |
| 333 | S | S.BpssB03ORFBP (100% identity) | S.BpsA79DORF332P | |
| 334 | 310 aa hypothetical protein | |||
| 335 | R | BpssB03ORFBP (100% identity) | BpsA79DORF332P | |
| 336 | 133 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3549 | 319 aa hypothetical protein | |||
| 3550 | M | M.BpssB03ORFAP (100% identity) | M.BpsA79DORF3550P | |
| 3551 | replicative DNA helicase | |||
| 23 | tryptophan synthase, alpha subunit | |||
| 24 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.BpsA79DORF24P |
| 25 | tryptophan synthase, beta subunit | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1264 | gram-negative porin family protein | |||
| 1265 | R | BpssB03ORFDP (100% identity) | CACAG | BpsA79DORF1266P |
| ??? | M | M.BpssB03ORFDP (100% identity) | CACAG | M.BpsA79DORF1266P |
| 1267 | gram-negative porin family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5250 | 44 aa hypothetical protein | |||
| 5249 | R | BpssB03McrCP (35% identity) | BpsA79DMcrCP | |
| 5251 | 44 aa hypothetical protein | |||
| 5252 | R | BpssB03McrBP (66% identity) | BpsA79DMcrBP | |
| 5253 | 62 aa hypothetical protein | |||