Salmonella enterica subsp. enterica serovar Agona 57.A.08 |
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Putative Salmonella enterica subsp. enterica serovar Agona 57.A.08 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,700,492 bp
GenBank #: CATT00000000 (NZ_CATT00000000)
REBASE acronym: Sen57A08
Org_num: 14922
All begin SA57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4281 | protein TIR | |||
| 4282 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen57A08ORF4282P |
| 4283 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen57A08ORF4282P |
| 4284 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen57A08ORF4282P |
| 4285 | R | SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | Sen57A08ORF4282P |
| 4286 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2808 | pbsx family phage portal protein | |||
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen57A08ORF2810P |
| 2810 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen57A08ORF2810P |
| 2811 | 62 aa hypothetical protein | |||
| 3583 | 670 aa hypothetical protein | |||
| 3584 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen57A08ORF3584P |
| 3585 | 97 aa hypothetical protein | |||
| 2812 | bacteriophage replication gene A | |||
| 2813 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen57A08ORF2813P |
| 2814 | 113 aa hypothetical protein | |||
| 2163 | pseudogene | |||
| 2164 | M | DNA adenine methylase | GATC | M.Sen57A08DamP |
| 2165 | ribulose-phosphate 3-epimerase | |||
| 3810 | DNA-binding protein Fis | |||
| 3811 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen57A08ORF3811P |
| 3812 | periplasmic protein | |||
| 4635 | carboxylate/amino acid/amine transporter | |||
| 4636 | V | V.StyUK1DcmP (100% identity) | V.Sen57A08DcmP | |
| 4637 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen57A08DcmP |
| 4638 | metal dependent phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2115 | cyanide-insensitive oxidase CioA | |||
| 2116 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen57A08ORF2117P |
| 2117 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen57A08ORF2117P |
| 2118 | major facilitator superfamily MFS_1 | |||