Salmonella enterica subsp. enterica serovar Agona 07.O.05 |
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Putative Salmonella enterica subsp. enterica serovar Agona 07.O.05 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,886,166 bp
GenBank #: CATK00000000 (NZ_CATK00000000)
REBASE acronym: Sen7O05
Org_num: 14921
All begin SA07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3691 | protein TIR | |||
| 3692 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen7O05ORF3692P |
| 3693 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen7O05ORF3692P |
| 3694 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen7O05ORF3692P |
| 3695 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen7O05ORF3692P |
| 3696 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4378 | protein YubE | |||
| 4379 | M | M.Sfl712783ORFFP (100% identity) | M.Sen7O05ORF4379P | |
| 4380 | YccB | |||
| 3675 | 97 aa hypothetical protein | |||
| 3676 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen7O05ORF3676P |
| 3677 | 670 aa hypothetical protein | |||
| 1243 | metal dependent phosphohydrolase | |||
| 1244 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen7O05DcmP |
| 1245 | V | V.StyUK1DcmP (100% identity) | V.Sen7O05DcmP | |
| 1246 | carboxylate/amino acid/amine transporter | |||
| 1857 | periplasmic protein | |||
| 1858 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen7O05ORF1858P |
| 1859 | DNA-binding protein Fis | |||
| 4762 | protein DamX | |||
| 4763 | M | M.StyTDamP (100% identity) | GATC | M.Sen7O05DamP |
| 4764 | ribulose-phosphate 3-epimerase | |||
| 635 | 113 aa hypothetical protein | |||
| 636 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen7O05ORF636P |
| 637 | bacteriophage replication gene A | |||
| 638 | 62 aa hypothetical protein | |||
| 639 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen7O05ORF639P |
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen7O05ORF639P |
| 641 | pbsx family phage portal protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2302 | cyanide-insensitive oxidase CioA | |||
| 2303 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen7O05ORF2304P |
| 2304 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen7O05ORF2304P |
| 2305 | major facilitator superfamily MFS_1 | |||